Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1364 ATGACTGTGAAATCGCGACAAAGATTCATTATTATGGTGGCTCTTAAATCGAAATGGAAAGATGGTGGTAGTGGTGGCGATGAAAAAAGGGTGGTTGTGAAATGGAAGAATGGTGGTGGCGTTGAACGAATAGACTATGGTATGGGAAACTCGAATGCTAAAAAGCGTGAGGCTCAACTTTCCGGAAGCGGAACCTTGTCGCCGCCGCCACCAGCGGAGCCACAGCGAGCATCAGAGAGGTCCGTCTCTGAAGAAGAAACAGTTTTCAATAAGCATCATCATGGCTCGGGGCACATCTCCGCAAAGGAGAAGTATGCTTTGATTCGTGATAACTTTACTACCCTAGAACAGGTTACAACTGCCTTGAGAAAAGAAGGTTTAGAATCCTCCAATCTTGTCCTCGGAATTGATTTCACAAAAAGCAATGAATGGACTGGCAGAATTTCGTTCAATAATAGAAGCCTACATGCTATTGGAACTACATGTAACCCGTATGAGAAAGCAATCTCTATCATTGGCAAAACATTGGCTCCTTTTGATGATGACAATTTGATTCCTTGTTTTGGCTTTGGTGATGCTACCACACATGACCAAGAAGTGTTTAGCTTTCACAGTGATCATTCACCTTGCCATGGGTTTGAAGAAGTTATGGCCTGCTATCAAAGAATAGTTCCAAACCTTAAACTTTCAGGTCCAACTTCTTATGCTCCGGTAATCGAGGCCGCAATAGACATGGTTGAGAAAACTAGTGGCCAATTTCATGTGTTAGTTATTGTTGCAGATGGCCAGGTTACAAGAAGTGCCAGCACCGATGATGGCGAACTCAGTTCTCAAGAAAAGAGGACAATCCAAGCAATTGTTGATGCAAGTTCATATCCACTCTCTATTATTCTGATTGGAGTTGGCGATGGACCTTGGGATGACATGAAAAAGTTTGACGACAAGATACCGGCACGTGATTTTGACAACTTTCAGTTTGTTAACTTCACTGAAATAATGTCCAAGAACTCGAGCGACTCTGAGAAAGAAGCAGCTTTTGCTCTGGCTTCCCTGATGGAGATACCTTTCCAATATAAAGCAGCCCTTGAACTTGGATTACTTGGTCGTGCTACAGGAAGGGCAAAGAAAATAGTTCCACGACCTCCTCCAGCTCCCTATTCACGGCCTCTGCCACCGGCTCAAGTTCTGAGAAACATGCCAACATCCATGGAAGATGACCAAAACCGAATGGTCTGCGCAATTTGTTTAACCAATGGAAAGGATTTGGCCTTTGGATGTGGTCACATGACCTGCAGAGATTGCGGATCCAGGTTAAATAACTGTCCCATATGCCGATCGAGGATCGCAAGTCGTCTCAGGGTATTCAGTGGGTGA 1374 0.4432 MTVKSRQRFIIMVALKSKWKDGGSGGDEKRVVVKWKNGGGVERIDYGMGNSNAKKREAQLSGSGTLSPPPPAEPQRASERSVSEEETVFNKHHHGSGHISAKEKYALIRDNFTTLEQVTTALRKEGLESSNLVLGIDFTKSNEWTGRISFNNRSLHAIGTTCNPYEKAISIIGKTLAPFDDDNLIPCFGFGDATTHDQEVFSFHSDHSPCHGFEEVMACYQRIVPNLKLSGPTSYAPVIEAAIDMVEKTSGQFHVLVIVADGQVTRSASTDDGELSSQEKRTIQAIVDASSYPLSIILIGVGDGPWDDMKKFDDKIPARDFDNFQFVNFTEIMSKNSSDSEKEAAFALASLMEIPFQYKAALELGLLGRATGRAKKIVPRPPPAPYSRPLPPAQVLRNMPTSMEDDQNRMVCAICLTNGKDLAFGCGHMTCRDCGSRLNNCPICRSRIASRLRVFSG* 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1364 457 MobiDBLite consensus disorder prediction 44 97 - -
Aev08g1364 457 SMART ring_2 412 444 IPR001841 -
Aev08g1364 457 Pfam Zinc finger, C3HC4 type (RING finger) 410 449 - -
Aev08g1364 457 SUPERFAMILY vWA-like 130 312 IPR036465 -
Aev08g1364 457 MobiDBLite consensus disorder prediction 78 93 - -
Aev08g1364 457 Gene3D von Willebrand factor, type A domain 166 346 IPR036465 -
Aev08g1364 457 Pfam Copine 154 367 IPR010734 -
Aev08g1364 457 ProSiteProfiles Zinc finger RING-type profile. 412 445 IPR001841 -
Aev08g1364 457 SMART VWA_4 129 332 IPR002035 -
Aev08g1364 457 PANTHER COPINE FAMILY PROTEIN 1 79 455 - -
Aev08g1364 457 SUPERFAMILY RING/U-box 404 450 - -
Aev08g1364 457 CDD RING-HC_RGLG_plant 411 455 IPR045317 GO:0061630|GO:0070534
Aev08g1364 457 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RGLG4 79 455 - -
Aev08g1364 457 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 393 456 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1364 Aev-Chr8 8926678 8937355 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev10g0862 10 11168716 11181571 Aev08g1364 08 8926678 8937355 PCT