Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1333 ATGGGACAAGAAACCAGAAAGCTGATAGATGAGTACGAGGTTTGTGAGATCCTAGGAAGAGGTGGATTCTCTGTTGTGAGAAAAGGCATCAAGAAATCATCATCAGGCAGTGACAAAACACACGTAGCCATCAAAACACTGAGAAGGGTATGTGCCTCCTCTGCCTCCCCTACTACTACCACTGCAAGAGCGAGGAGAAGAGATGAAGAGAAGATGAGCAGCATGGGCCCCACATGGAGACAGGTATCGGTGTCTGATGCTCTGCTCACCAATGAGATTCTGGTGATGAGGAAGATTGTGGAAAAGGTTTCACCGCACCCCAATGTGGTTGACCTCTACGATGTCTATGAAGACTCAAATGGTGTTCATCTTGTGCTCGAGCTCTGTTCTGGTGGGGAACTCTTTGATCGGATTGTCTCACATGACAGGTACACAGAGAGCGAGGCTGCAGGGGTGGTTCGGCAGATTGCAGCAGGATTGGATGGTATTCATAGAGCTAAGATTGTGCATAGAGACTTGAAACCTGAGAATTGCTTGTTCCTGGACAGTAGGAAGGAGTCTCCTCTCAAGATCATGGACTTTGGGTTGAGCTCTGTTGAGGAGTTTACTGACCCAGTTGTTGGCTTGTTTGGATCCATTGATTATGTCTCACCGGAGGCACTCTCTCAGGGCAACGTCACTGCTAAGAGTGACATGTGGTCACTTGGAGTAATTCTCTACATCTTACTCTCTGGGTATCCACCTTTCATTGCTCAGACTAATCGCCAAAAACAACAAATGATATTGAATGGGAATTTCAGCTTCTACGAGAAGACATGGAAGGGCATTTCCCAATCAGCGAAGCAATTGATTTCAGATCTTCTCAATGTTGATCCCACTAGAAGACCTAGTGCTCAACACATCCTAAGTCATCCATGGGTGAGAGGTGATGGAGCCAAAGATGACGAAATGGACCCGGAGATCGTGTCGAGGTTGCAAAGCTTCAATGCTCGTCGCAAACTTCGTGCAGCTGCAATTGCTAGTGTGTGGAGCACCACAGTTTTCTTGAGAACCAAGAAACTGAAATCCCTGATAGGATCCTACGATCTCACAGAGGAGGAGATTGAAAATCTCAGGATACATTTCAAGAAGATATGTGGAAATGGCGAGAATGCGACCCTGGCAGAGTTTGAGCAAGTGGTGAAAGCAATGAATATGGCATCACTGATTCCGTTAGCACCGCGCATATTTGACTTGTTTGACAACAACCGCGATGGAACAGTTGACATGCGGGAGATACTGTGTGGCTTCTCCACCCTTAAAAATTCCAAGGGAGATGATGCCCTTCGGTTGTGCTTCCAGATGTATGATGCGGATAGATCAGGGTGCATCACCAAGGAAGAAGTTGCATCCATGCTTAGGGCTTTGCCAGATGATTGTCTTCCGGTGGATATAACGGAACCTGGGAAATTGGATGAGATATTTGACATAATGGATGCCAACAGTGATGGAAAAGTTACCTTCGATGAATTCAAAGCTGCAATGCAGAAAGATAGTTCTCTCCAAGATGTACTCCTTTCTTCTCTTCGCCCACTATAG 1578 0.4632 MGQETRKLIDEYEVCEILGRGGFSVVRKGIKKSSSGSDKTHVAIKTLRRVCASSASPTTTTARARRRDEEKMSSMGPTWRQVSVSDALLTNEILVMRKIVEKVSPHPNVVDLYDVYEDSNGVHLVLELCSGGELFDRIVSHDRYTESEAAGVVRQIAAGLDGIHRAKIVHRDLKPENCLFLDSRKESPLKIMDFGLSSVEEFTDPVVGLFGSIDYVSPEALSQGNVTAKSDMWSLGVILYILLSGYPPFIAQTNRQKQQMILNGNFSFYEKTWKGISQSAKQLISDLLNVDPTRRPSAQHILSHPWVRGDGAKDDEMDPEIVSRLQSFNARRKLRAAAIASVWSTTVFLRTKKLKSLIGSYDLTEEEIENLRIHFKKICGNGENATLAEFEQVVKAMNMASLIPLAPRIFDLFDNNRDGTVDMREILCGFSTLKNSKGDDALRLCFQMYDADRSGCITKEEVASMLRALPDDCLPVDITEPGKLDEIFDIMDANSDGKVTFDEFKAAMQKDSSLQDVLLSSLRPL* 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1333 525 ProSitePatterns EF-hand calcium-binding domain. 450 462 IPR018247 -
Aev08g1333 525 Pfam Protein kinase domain 97 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1333 525 ProSiteProfiles EF-hand calcium-binding domain profile. 401 436 IPR002048 GO:0005509
Aev08g1333 525 Gene3D - 327 519 - -
Aev08g1333 525 MobiDBLite consensus disorder prediction 53 76 - -
Aev08g1333 525 SUPERFAMILY Protein kinase-like (PK-like) 5 330 IPR011009 -
Aev08g1333 525 ProSiteProfiles EF-hand calcium-binding domain profile. 437 472 IPR002048 GO:0005509
Aev08g1333 525 Gene3D Phosphorylase Kinase; domain 1 5 135 - -
Aev08g1333 525 ProSitePatterns EF-hand calcium-binding domain. 414 426 IPR018247 -
Aev08g1333 525 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 509 - -
Aev08g1333 525 CDD EFh 408 467 IPR002048 GO:0005509
Aev08g1333 525 SUPERFAMILY EF-hand 351 517 IPR011992 -
Aev08g1333 525 SMART serkin_6 12 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1333 525 CDD EFh 442 509 IPR002048 GO:0005509
Aev08g1333 525 CDD STKc_CAMK 12 306 - -
Aev08g1333 525 ProSiteProfiles EF-hand calcium-binding domain profile. 479 514 IPR002048 GO:0005509
Aev08g1333 525 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
Aev08g1333 525 Pfam EF-hand domain pair 440 509 IPR002048 GO:0005509
Aev08g1333 525 ProSiteProfiles Protein kinase domain profile. 12 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aev08g1333 525 ProSitePatterns EF-hand calcium-binding domain. 492 504 IPR018247 -
Aev08g1333 525 PANTHER CALCIUM AND CALCIUM/CALMODULIN-DEPENDENT SERINE/THREONINE-PROTEIN KINASE 12 509 - -
Aev08g1333 525 Pfam EF hand 410 425 IPR002048 GO:0005509
Aev08g1333 525 PRINTS Recoverin family signature 499 519 - -
Aev08g1333 525 PRINTS Recoverin family signature 363 382 - -
Aev08g1333 525 PRINTS Recoverin family signature 433 452 - -
Aev08g1333 525 PRINTS Recoverin family signature 409 430 - -
Aev08g1333 525 ProSitePatterns Protein kinases ATP-binding region signature. 18 45 IPR017441 GO:0005524
Aev08g1333 525 SMART efh_1 405 433 IPR002048 GO:0005509
Aev08g1333 525 SMART efh_1 483 511 IPR002048 GO:0005509
Aev08g1333 525 SMART efh_1 441 469 IPR002048 GO:0005509
Aev08g1333 525 Gene3D Transferase(Phosphotransferase) domain 1 136 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1333 Aev-Chr8 8592073 8596223 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1333 98 512 EF-hand Containing Proteins AT3G10660 37.352 2.20e-79 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMK1-DCAMKL Aev08g1333 Pkinase 1.5e-56 CL0016