Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g1325 ATGAAGAGGTCTCCTCGGGAATTATCATCATCATCTTGTTCATCATCTTCTTCTGTTGGTGGGTTTGAATCTCCCAATAGGAGGCGTAACAAGTGCACAACAACAACCACAAGCTCTTCTATGATCATGAAGCCACGCCAAAATAGTACTAGTTACCAGAAACAAACCACCGGCAACAGAAGAAGAAGCTCAATTTACAGAGGAGTCACCAGGCATAGATTGACTGGGAGGTTCGAAGCTCACCTTTGGGATAAGAGTTCTTGGAACTCTGTTCAGACCAAGAAGGGACGACAAGAAGAAACTGCAGCCCGTACCTATGATCTAGCAGCTCTTAAATATTGGGGAAAGGATGCAATCTTGAATTTCCCGATAGAAACATATACGAAGGAAATTGAGGAAATGGACATGTTTTCAAGAGAAGAGTTTTTGGCTTCTTTGCGGCGACATAGCAATGGTTTCTCTAGAGGCGTCTCTAAGTACCGTGGGGTGGCTAGGCATCACCACAATGGGCGCTGGGAAGCACGCATTGGAAGAGTAAATGGAAGCAAGTACATTTACTTGGGTACATTTGAAACTCAAGAAGAGGCAGCAGAGGCATACGACAAGGCAGCTTTGGAGTACAGAGGACTAAACGCAGTGACCAATTTCGACAAACGAAAATACAAAGACCAAATCCCAACAAAGAACAACCAGCAATCCTCCCAAGAAACAGAATCTGTTCAAAAAAGGAAGAGAAGTAAGCAATCCCAACTAACACTAACTGCAACAGAAACAGAAACTGAAACTGAAACAAGAAGAGGAACAGATCCCAGCAACTACTCTGAAACCGAGCAAGCAGCAAAAAAACAGGATCAGCAATTAGAAGTTCAATGCAACAGTATGAGTAGTGTCCCTCTGAGTATGGAATCCATTATCACTCCAGTTTCTACTAGTTCTGTAGTGGACAATAATGTCATTGATCAGGATCTGGCATGGAACTTCATGGATGGTATAATCCTGCCTCAATTTCAGACCCCAGAATTGGCTTCAAGCAGAGCTGAGGATGTTCTGAGCTTGTTCTATAATGCAGAATTCGACGACGCCGACATCGAATTTCTCTTCAGCTCGGAGCCTACTGAGAGTGATTTCAATTTGAGTTCAGTTTTAGACAGTTTCGGAAGTGATGAAGATGTTGTGAATGATAATAATAATAATAACAAAATAAACACAAGCACCAATTGA 1221 0.4242 MKRSPRELSSSSCSSSSSVGGFESPNRRRNKCTTTTTSSSMIMKPRQNSTSYQKQTTGNRRRSSIYRGVTRHRLTGRFEAHLWDKSSWNSVQTKKGRQEETAARTYDLAALKYWGKDAILNFPIETYTKEIEEMDMFSREEFLASLRRHSNGFSRGVSKYRGVARHHHNGRWEARIGRVNGSKYIYLGTFETQEEAAEAYDKAALEYRGLNAVTNFDKRKYKDQIPTKNNQQSSQETESVQKRKRSKQSQLTLTATETETETETRRGTDPSNYSETEQAAKKQDQQLEVQCNSMSSVPLSMESIITPVSTSSVVDNNVIDQDLAWNFMDGIILPQFQTPELASSRAEDVLSLFYNAEFDDADIEFLFSSEPTESDFNLSSVLDSFGSDEDVVNDNNNNNKINTSTN* 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g1325 406 MobiDBLite consensus disorder prediction 7 62 - -
Aev08g1325 406 MobiDBLite consensus disorder prediction 1 62 - -
Aev08g1325 406 ProSiteProfiles AP2/ERF domain profile. 159 217 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 Pfam AP2 domain 158 209 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 CDD AP2 64 124 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 SMART rav1_2 159 223 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 SMART rav1_2 65 129 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 ProSiteProfiles AP2/ERF domain profile. 65 123 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 SUPERFAMILY DNA-binding domain 158 217 IPR016177 GO:0003677
Aev08g1325 406 Gene3D AP2/ERF domain 65 125 IPR036955 GO:0003700|GO:0006355
Aev08g1325 406 Gene3D AP2/ERF domain 158 219 IPR036955 GO:0003700|GO:0006355
Aev08g1325 406 MobiDBLite consensus disorder prediction 271 285 - -
Aev08g1325 406 SUPERFAMILY DNA-binding domain 64 125 IPR016177 GO:0003677
Aev08g1325 406 CDD AP2 158 217 IPR001471 GO:0003700|GO:0006355
Aev08g1325 406 MobiDBLite consensus disorder prediction 221 285 - -
Aev08g1325 406 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR WRI1 1 335 - -
Aev08g1325 406 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 335 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g1325 Aev-Chr8 8517678 8521656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g1325 147 246 AP2-EREBP Transcription Factor Family AT1G72570 34.259 2.57e-10 60.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Aev08g1325 AP2 5.6e-13 CL0081