Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0953 ATGTTCAGAATACCAAATCAAAACCCCATTTTTGAGTGCTGTTTCGTCTTCCTACTCTTGCAGGTTCTCCTCACATCACCACCACAAGTGGCATGCAAATCCACCATAGAGCCTTGCACAAACTCAGACTCATGCAACGCCCTCCTTGGCTACACTCTCTACACAGACCTCAAAGTCTCAGAGGTTGCTTCGCTCTTCCAAATCGACCCCATATCTCTTCTCACAGCAAATGCCATTGACATCTCTTACCCTGACGTGGAGCACCACATTCTCCCTTCAGGGCTTTTCCTCAAGATCCCTATCTCATGTTCCTGTGTTGATGGGATTAGAAAATCGGTTTCAACACATTACAAGACACGCCCTTCTGATACCCTTACTTCCATTGCTGACTCTGTTTATGGTGGTTTGGTCTCTGCTGACCAGCTAGCTGAGGCTAACTCCATTAATGACCCTTCGGTGCTTGATGTGGGTCAGAGCCTTGCGGTGCCTCTTCCTTGCACTTGCTTCAATGGCACTGATAATTCTCTGCCTGCTATTTACTTGTCATATGTGGTTCAACCGGTTGATTCTTTGGCTGCTATTGCGGCTAGGTACTTCACAACTCTCACTGATTTGATGAATGTCAATGCCATGGGAAGCACATCTATCACTGATGGTGATATCCTTGCTGTTCCAATACCGGCTTGTGCTTCAAATTTTCCAAAATATGCTTCTGATTTTGGCTTGCTTGTCCCTAATGGAAGTTATGCCATTACAGCAGGCCATTGTGTCCAGTGTAGCTGTGGACCACGGAATCTAAACTTGTACTGTATGCCAGCTTCTCTGGCTGTTTCTTGCTCCAGCATGCAATGTAAAAACAGCAATCTCATGCTTGGGAATGTTACGATTCAACAGAGTAGTGGTGGTTGCAATGTTACTTCTTGTAGCTATGATGGCATTTCTAATGGCACCATACTAACAACGCTGTCCCCATCCCTTCAACCTCGATGTCCAGGAGCTCAGGAATTCCCTCCTCTCATAGCCCCACCTACATCAGTTAGCAGGGATACGGTATTTGCGCCTGCACCATCACCTCAGTCAGATGGATTCAGTCCAGCAACACCCAAATCGTCGGTGGTGCCTTCAACGGGGCTTCCAGGATTCTCTCCTGCGAATGGCCCTATTAGCGCCCTTTCATCCGGCGCTTCTGCTGCTTGCTCCTTGGTTAATCCATTACCCATGTTGACATGTGCACTTGTGTTATTATTTGTCAAGTTGATGATCCCAGCGGCATTGTTGTAA 1281 0.4699 MFRIPNQNPIFECCFVFLLLQVLLTSPPQVACKSTIEPCTNSDSCNALLGYTLYTDLKVSEVASLFQIDPISLLTANAIDISYPDVEHHILPSGLFLKIPISCSCVDGIRKSVSTHYKTRPSDTLTSIADSVYGGLVSADQLAEANSINDPSVLDVGQSLAVPLPCTCFNGTDNSLPAIYLSYVVQPVDSLAAIAARYFTTLTDLMNVNAMGSTSITDGDILAVPIPACASNFPKYASDFGLLVPNGSYAITAGHCVQCSCGPRNLNLYCMPASLAVSCSSMQCKNSNLMLGNVTIQQSSGGCNVTSCSYDGISNGTILTTLSPSLQPRCPGAQEFPPLIAPPTSVSRDTVFAPAPSPQSDGFSPATPKSSVVPSTGLPGFSPANGPISALSSGASAACSLVNPLPMLTCALVLLFVKLMIPAALL* 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0953 426 CDD LysM 182 224 IPR018392 -
Aev08g0953 426 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 22 376 - -
Aev08g0953 426 SMART LysM_2 116 163 IPR018392 -
Aev08g0953 426 SMART LysM_2 182 225 IPR018392 -
Aev08g0953 426 ProSiteProfiles LysM domain profile. 181 224 IPR018392 -
Aev08g0953 426 MobiDBLite consensus disorder prediction 360 375 - -
Aev08g0953 426 MobiDBLite consensus disorder prediction 350 375 - -
Aev08g0953 426 ProSiteProfiles LysM domain profile. 115 162 IPR018392 -
Aev08g0953 426 Pfam LysM domain 183 225 IPR018392 -
Aev08g0953 426 Pfam LysM domain 117 163 IPR018392 -
Aev08g0953 426 Gene3D LysM domain 171 233 IPR036779 -
Aev08g0953 426 Gene3D LysM domain 109 170 IPR036779 -
Aev08g0953 426 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 22 376 - -
Aev08g0953 426 SUPERFAMILY LysM domain 181 226 IPR036779 -
Aev08g0953 426 SUPERFAMILY LysM domain 115 164 IPR036779 -
Aev08g0953 426 CDD LysM 115 162 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0953 Aev-Chr8 5641987 5644329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0953 2 400 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 70.149 0.0 560
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0953 - - gmx:100808966 694.886
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0953 08 5641987 5644329 Aev08g0953 08 5641987 5644329 ECH