Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0845 ATGTTCCCACAAGAGCATGCTACTACTAGTCTTATAGATACTGGTAGTAGTAGTAGTCTAGAGCAGATAATAATGTTGCAGCAGCAGCAATTCTCATATGCTCCTATGCCAATTAACCCAGACCCAATAATAATGGAGCGATCAATAACCTCATCAACAACAAGGTGGAAGCCAAACATTGAGGTTGCTCCCAATTGCCCTCGCTGCGCTTCCACCAACACCAAATTCTGTTACTACAACAATTACAGCCTCTCACAGCCTAGGTACTTCTGCAAAGGCTGCAGGCGTTACTGGACCAAAGGTGGCTCCCTCCGCAACGTCCCCGTCGGCGGCGGATGCAGAAAGAACCGCCGCGGCAAGGCGGCCAGGCACTCTGAAAGCGAACGCCTTTCCGCCATCAATAATAATTCTGATGACAGCAGAGAGTCATTATCAGCAGGTGATCAAGGCAGTGAAACCAACAACGGGTCACGTGACATAGACATGGCCCTTGTGTTCGCCAAATTCTTGAACCAAAAACCGACCTCTAACGAGGAGTACGGCTCCTCGTCGACTTCCAACAACCTGTCGAATTCTTTGACGACGACGACACCGGAAAGCGGTGAGAATATTGACAAGGATGTGGTGGTTCAGCCTCAGAAGAAGGGGTCTGAATTTGATGGTGATGATCCTCTGGGACTACTACTTGGTGGGGTCCACGTTGAAGGGTCTATGGAGAATTTTATTGATGAGTTGGATGGGTTTGATGACGTGTGGCGTGATGATGATGCTGCTGTTACATATTGCTGGCAACCGCCGCCGCTTCCTTCTCCGCCGCCGCCAACGATGATGCAGATGCAATTGCAGGAGCTGGAGGAGTACGCGATTGCGCCTTTATTGAATGAAGAGGGTGGTCATCATCATCATCACCGTGAATTGACGTTACCGGCGATTAATTCTTCTAATAGCATGGATTTACTAATAAGCGAAGGTTGGAGTACTAATTGGGGCTCATTTGATCTCTCAACTACGGATGTCTTCTCATCATCACGACCTTCATTTATCAATTAG 1050 0.4829 MFPQEHATTSLIDTGSSSSLEQIIMLQQQQFSYAPMPINPDPIIMERSITSSTTRWKPNIEVAPNCPRCASTNTKFCYYNNYSLSQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGKAARHSESERLSAINNNSDDSRESLSAGDQGSETNNGSRDIDMALVFAKFLNQKPTSNEEYGSSSTSNNLSNSLTTTTPESGENIDKDVVVQPQKKGSEFDGDDPLGLLLGGVHVEGSMENFIDELDGFDDVWRDDDAAVTYCWQPPPLPSPPPPTMMQMQLQELEEYAIAPLLNEEGGHHHHHRELTLPAINSSNSMDLLISEGWSTNWGSFDLSTTDVFSSSRPSFIN* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0845 349 MobiDBLite consensus disorder prediction 175 205 - -
Aev08g0845 349 MobiDBLite consensus disorder prediction 108 157 - -
Aev08g0845 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.2 49 196 - -
Aev08g0845 349 Pfam Dof domain, zinc finger 64 118 IPR003851 GO:0003677|GO:0006355
Aev08g0845 349 MobiDBLite consensus disorder prediction 175 202 - -
Aev08g0845 349 ProSitePatterns Zinc finger Dof-type signature. 66 102 IPR003851 GO:0003677|GO:0006355
Aev08g0845 349 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 49 196 IPR045174 GO:0003700|GO:0006355
Aev08g0845 349 MobiDBLite consensus disorder prediction 128 157 - -
Aev08g0845 349 ProSiteProfiles Zinc finger Dof-type profile. 64 118 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0845 Aev-Chr8 4974121 4975170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0845 45 174 C2C2-Dof Transcription Factor Family AT3G52440 56.204 1.65e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev08g0845 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0845 - - mtr:MTR_3g090430 246.514