Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0774 ATGGACACACCTCAGTGGGCACAGGGTATTGGAGTGGTTAAACCTATGGAAAGTGGTCCAAAGGGTTCTTCTGGTGGTATTTTGGAGAGAAGGGCAAGGCCAGTGAAGGATCAAGCTCTGAACTGTCCAAGGTGCAACTCAACCAACACAAAATTCTGTTACTACAACAACTACAGCCTGTCACAGCCAAGGTACTTCTGCAAGACCTGTAGAAGGTATTGGACTGAGGGTGGCTCCTTGAGGAATGTTCCTGTTGGTGGTGGATCAAGGAAGAACAAGAGATCCACCCCTTCTTCATCAACCACAACAACATCTTCAACATCCACACTACCATCATCTAAGAAGCTTCTCCCTGATCTGATGACACCACCACCACCACAACAGAGCTTCCCTCATCATCAATCTGCATCTCAGAACCCAAAGATCCATCAAGCCCAAGATCTTAACTTAGCATACCCACCACCTAATAATAATAATAATAATAATTCTCATCATGATGACTACAGCAACAACAACATAAACAGCATATCTAGTTCTAATAATTGCTCTGCTGCGATGGAGCTTCTGAAAAGTGGGATTGCATCATCGAGGGGGTTGAATTCATTCATGCCCATGTCGCTATCAGATTCGAGTAATACAATGTACAGTTCAGCAGGGTTGATTCCTATGCAAGAGTTTAAGCCTAGTACTGCTGCAGGGCTTAACTTCAGTTTAGAAGGTTTTGAGAATGGATACGGTGCTGCTCTTGAAGGGATTCATCATCATCATCATCATCATGAAGAGGACTCTGCAGGTGCAAGAGTGTTGTTTCCTGTGGAGGATTTGAAGCAGCATCAGGTTCAAAGCAGCAATCATCATCAAGGGGATTCAACTGGGTATTGCTGGAATGGTATGTTAGGTGGAGGATCATGGAGTGAATGA 921 0.443 MDTPQWAQGIGVVKPMESGPKGSSGGILERRARPVKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSTPSSSTTTTSSTSTLPSSKKLLPDLMTPPPPQQSFPHHQSASQNPKIHQAQDLNLAYPPPNNNNNNNSHHDDYSNNNINSISSSNNCSAAMELLKSGIASSRGLNSFMPMSLSDSSNTMYSSAGLIPMQEFKPSTAAGLNFSLEGFENGYGAALEGIHHHHHHHEEDSAGARVLFPVEDLKQHQVQSSNHHQGDSTGYCWNGMLGGGSWSE* 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0774 306 MobiDBLite consensus disorder prediction 78 174 - -
Aev08g0774 306 Pfam Dof domain, zinc finger 37 94 IPR003851 GO:0003677|GO:0006355
Aev08g0774 306 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 18 301 - -
Aev08g0774 306 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
Aev08g0774 306 MobiDBLite consensus disorder prediction 1 32 - -
Aev08g0774 306 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 18 301 IPR045174 GO:0003700|GO:0006355
Aev08g0774 306 MobiDBLite consensus disorder prediction 131 174 - -
Aev08g0774 306 MobiDBLite consensus disorder prediction 89 115 - -
Aev08g0774 306 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0774 Aev-Chr8 4466560 4468987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0774 30 304 C2C2-Dof Transcription Factor Family AT3G61850 43.357 1.01e-55 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev08g0774 zf-Dof 1.3e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev08g0774 - - vvi:100264143 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0774 08 4466560 4468987 Aev08g0774 08 4466560 4468987 ECH