Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0407 ATGTTGTGTGCTTGCTCCGGGGAGCAATTCAAATTCGAGGAGCCGCCGCCGCAGTCGCCGGATTCCCTTGCAACAAGGGATTTCTCAGCCAGTGGACTTTCTTCCAGGACTGGGGATTGGGATGCCAAATTCGATGATACCCAAGTAGAAGAAGTTGAGTCCACTCTTAAAGAAGCTCTTTCCTTAAACTATGAGGAAGCTAGGGCTTTGCTGGGGAGGCTTGAATACCAAAGAGGGAACTTCGATGCTGCCCTTCAAGTATTTCAAGGCATAGACATCAAGAGTTTGACCCCAAGGATGATCAGGGCAATTTCTGAGAGAACCAAGCCAAGAAAACCACGGTCCAAGGCAGACACTGTGGTTCCAAATGTGATGTCATTGCACTCAGTAAGCCTCCTTCTTGAGGCAATTTTGCTCAAAGCAAAATCGTTGGAGGAACTTGGGCGATACATTGAGGCTGCAAAGGAGTGCAGAATAATTCTGGACACAGTTGAATCTGCCCTTCCTAAGGGAATGCCTGAGGGCATTGGTGAAGATTGTAAGTTGCAAGAAATGTTTCACAGAGCATTGGAGTTGCTACCAAACCTATGGATCAAGGCAGGCATTCTAGATGAGGCTGTCACTGCATATCGTCGTGCTCTTGTCAAGCCATGGAATTTGGATCGACGGAGGTTGGCTGCTGTACAAAAAGAATTAGCCGTAACGCTTCTCTATGGTGGTGTTGAAGTTAGCCTTCCCCCTCAGTTGCAGATTTGGGGTCCAACAACACCCAAGAATAACACTGAAGAAGCAATACATTTGCTATTAGTCCTCATGCACAAGGTGGCAATTCAGGAAATAGACTGGGATGCTGAAATAATGGATCATCTTACATTTGCACTTTCCGTTACTGGGTTGTTTGAGTCATTGGCAAGTCACATAGAGCAGATCCTCCCAGGTATCTATAATCGAGTTGAGAGGTGGTACCTCCTTGCTCTGTGTTATAGTGCAGCAGGACAGAATGACGTAGCACTGAACCTTCTGAAGAAGGCTTGTGGTAGTTCTGAAGCCAAGCATAGAGCCCACTTTCCTTCATTTTTGTTAGGAGCAAAACTGGGTTCCCAAGATCCCAGCCACGCTCATGAAGGCATTAGCTTTTCACGTGGAGTCATTGATTTAGCCAAGCATCAAAATGAGCATTTTTTGGGTCAAGGCCACAAATTTCTTGGCATTTGCTATGGGGCTGCAGCTAGAATTTCTGTGTTGGATTCTGAAAGAAGTATATTTCAAAGAGAGTCTTTGAACTTTCTGAACCTTGCTGCTGTTAATGGAAATGCTGATCCGGAAGTGGTATTCAGCCTTGGACTAGAAAATGCAATTCAAAGGAATCTGGATGCAGCTTATGACAATTTGATGATGTACTCAGACATGACCGTTGGCAGCTCAGGAAGAGGTTGGCAGTTGCTAGCACTCGTAGTATCTGCACAGAAGCGGTTTAAGGATGCTGAAACTATAGTTGATTTTGCTTTGGATGAGGCTGGTAGGATGGATCAGTTAGAACTTCTAAGATTGAAAGCAGTACTTCAGATTGCTCAGCAGCAACCCAAGCAAGCAATTGAGACCTACAGAATCTTGCTTGCTCTAATTCATGCTAAGAAGGAGTTATGGCTTCAAGATAAGAATTTTGATCAACCAAAAGCATTTAAGCATGAGGCACTAACTGAGAAGAAGTTGGAAATGGAAGCCTGGCAAGATTTGGCTACCATTTATACTGATGCCGGTTCCTTGCTCGATGCAAAGGCTTGTGTTGACAGATCCCAGTTGATAGAATTTTTTTCTCCAAGAAGTTGGCATATTACAGGGAAGTTGTTGGAAGCTCAATCATTATACAAAGAGGCCTTTGTTTCCTTTTCCGTCTCATTATCAATAGAGCCAGATTACGTTCCGAGTATCATTTCAACTGCAGAATTATTTCTTAAACTTGGTATGCAGTCACTTCCAATTGCAAGAAGCTTTCTGATGAATGCTCTGCAATTAGAACCCACAAACCATAATGCTTGGTTCAATCTTGGATTAGTTTCAAAAACTGAAGGTTCCTTACAACAAGCAGCAGATTTCTTCCAAGCTGCATATGAACTGAAGCTTTCGGCTCCAGTGCAGAAATTTGAGTAA 2151 0.4379 MLCACSGEQFKFEEPPPQSPDSLATRDFSASGLSSRTGDWDAKFDDTQVEEVESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKSLTPRMIRAISERTKPRKPRSKADTVVPNVMSLHSVSLLLEAILLKAKSLEELGRYIEAAKECRIILDTVESALPKGMPEGIGEDCKLQEMFHRALELLPNLWIKAGILDEAVTAYRRALVKPWNLDRRRLAAVQKELAVTLLYGGVEVSLPPQLQIWGPTTPKNNTEEAIHLLLVLMHKVAIQEIDWDAEIMDHLTFALSVTGLFESLASHIEQILPGIYNRVERWYLLALCYSAAGQNDVALNLLKKACGSSEAKHRAHFPSFLLGAKLGSQDPSHAHEGISFSRGVIDLAKHQNEHFLGQGHKFLGICYGAAARISVLDSERSIFQRESLNFLNLAAVNGNADPEVVFSLGLENAIQRNLDAAYDNLMMYSDMTVGSSGRGWQLLALVVSAQKRFKDAETIVDFALDEAGRMDQLELLRLKAVLQIAQQQPKQAIETYRILLALIHAKKELWLQDKNFDQPKAFKHEALTEKKLEMEAWQDLATIYTDAGSLLDAKACVDRSQLIEFFSPRSWHITGKLLEAQSLYKEAFVSFSVSLSIEPDYVPSIISTAELFLKLGMQSLPIARSFLMNALQLEPTNHNAWFNLGLVSKTEGSLQQAADFFQAAYELKLSAPVQKFE* 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0407 716 Coils Coil 57 77 - -
Aev08g0407 716 MobiDBLite consensus disorder prediction 8 39 - -
Aev08g0407 716 PANTHER PROTEIN NPG1 1 715 IPR043376 -
Aev08g0407 716 Pfam Tetratricopeptide repeat 678 707 IPR019734 GO:0005515
Aev08g0407 716 ProSiteProfiles TPR repeat profile. 677 710 IPR019734 GO:0005515
Aev08g0407 716 SUPERFAMILY TPR-like 564 707 IPR011990 GO:0005515
Aev08g0407 716 Gene3D Tetratricopeptide repeat domain 423 712 IPR011990 GO:0005515
Aev08g0407 716 Gene3D Tetratricopeptide repeat domain 33 354 IPR011990 GO:0005515
Aev08g0407 716 SUPERFAMILY TPR-like 133 541 IPR011990 GO:0005515
Aev08g0407 716 MobiDBLite consensus disorder prediction 22 36 - -
Aev08g0407 716 SMART tpr_5 512 545 IPR019734 GO:0005515
Aev08g0407 716 SMART tpr_5 677 710 IPR019734 GO:0005515
Aev08g0407 716 SMART tpr_5 607 640 IPR019734 GO:0005515
Aev08g0407 716 SMART tpr_5 476 509 IPR019734 GO:0005515
Aev08g0407 716 SMART tpr_5 318 351 IPR019734 GO:0005515
Aev08g0407 716 SMART tpr_5 134 167 IPR019734 GO:0005515
Aev08g0407 716 PANTHER PROTEIN NPGR1 1 715 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0407 Aev-Chr8 2255372 2258049 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0407 1 715 Calmodulin-binding Proteins AT1G27460 60.362 0.0 857
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0407 08 2255372 2258049 Aev08g0407 08 2255372 2258049 ECH
Aev07g0909 07 6445614 6449180 Aev08g0407 08 2255372 2258049 PCT