Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0401 ATGGAAACGGATATTCCGGCGAATTACAGCTACATGGGACGGAAATTCAGCCAACTCAGCATGAACGACGATTCCTCCTCTGCCTTCAGCGACTGCAACAGCGACAGATCTGGCGAATTCCCCACCGCTTCTTCCCAGAGCCGCCGCCTCCTAATCGCCTGCGCCTCCGACAACTCCGACGATTTCATCCTCCAGCTTGTCCAAGACCTCGACTCCTGTTCGATTGAGGAGCAAAAACAAGCCGCCATGGAGATCCGATTACTGGCCAAGAACAAGCCAGAAAACCGCCTCAAAATCGCAAGAGCCGGCGCAATCAAGCCCTTAATCTCCCTCATATCGTCCCAAGACCTTCAGCTACAAGAATACGGAGTCACCGCGATCCTGAATCTGTCTCTATGCGACGAGAACAAGGAAGATATAGCTTCTTCGGGAGCGATTAAGCCTCTGGTTCGAGCTCTGAAAACAGGGACTCCAACTGCGAAGGAGAACGCCGCCTGCGCCCTGCTCCGACTCTCGCAGGTGGAAGAGAACAAGGTGGCGATCGGGAGGTCAGGGGCGATTCCGCCGCTGGTGAACCTTCTAGAAGGAGGAGGGTTCCGAGCGAAGAAGGACGCGTCGACGGCTCTGTACTCGCTCTGTTCGGTGAAGGAGAACAAGATCAGGGCGGTGAGGGCGGGGATCATGAAGCCGCTGGTGGAGCTCATGGCGGACTTGGGATCCAACATGGTGGACAAGTCCGCGTACGTTCTTAGCGTCCTGGTTTCGGTGGCGGAGGCGAGGGCGGCGCTGGTGGATGAAGGAGGGATCCCGGTGCTGGTGGAGATCGTGGAGGTTGGGTCGCAGAGGCAGAAGGAGATCGCGGTGGTCATTCTGTTGCAGCTCTGCGAGGACAAGGTGAGTTACCGCACAATGGTGGCGCGCGAAGGAGCAATTCCTCCCTTGGTGGCTCTGACACAGAACGGCACCAATCGCGCCAAGCAAAAGGCGGAGACACTGATAGAACTTCTACGGCAACCAAGATCCGGCAACGCCGCTGCTCGAAGTACTTGTTCATCGTCATCAGAGGTATCAGTATGA 1077 0.5664 METDIPANYSYMGRKFSQLSMNDDSSSAFSDCNSDRSGEFPTASSQSRRLLIACASDNSDDFILQLVQDLDSCSIEEQKQAAMEIRLLAKNKPENRLKIARAGAIKPLISLISSQDLQLQEYGVTAILNLSLCDENKEDIASSGAIKPLVRALKTGTPTAKENAACALLRLSQVEENKVAIGRSGAIPPLVNLLEGGGFRAKKDASTALYSLCSVKENKIRAVRAGIMKPLVELMADLGSNMVDKSAYVLSVLVSVAEARAALVDEGGIPVLVEIVEVGSQRQKEIAVVILLQLCEDKVSYRTMVAREGAIPPLVALTQNGTNRAKQKAETLIELLRQPRSGNAAARSTCSSSSEVSV* 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0401 358 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 1 347 - -
Aev08g0401 358 SMART arm_5 92 132 IPR000225 GO:0005515
Aev08g0401 358 SMART arm_5 174 214 IPR000225 GO:0005515
Aev08g0401 358 SMART arm_5 133 173 IPR000225 GO:0005515
Aev08g0401 358 SMART arm_5 298 338 IPR000225 GO:0005515
Aev08g0401 358 SMART arm_5 256 296 IPR000225 GO:0005515
Aev08g0401 358 SMART arm_5 215 255 IPR000225 GO:0005515
Aev08g0401 358 Pfam Armadillo/beta-catenin-like repeat 176 214 IPR000225 GO:0005515
Aev08g0401 358 Pfam Armadillo/beta-catenin-like repeat 134 172 IPR000225 GO:0005515
Aev08g0401 358 Pfam Armadillo/beta-catenin-like repeat 93 131 IPR000225 GO:0005515
Aev08g0401 358 PANTHER U BOX DOMAIN-CONTAINING 1 347 - -
Aev08g0401 358 Gene3D - 16 199 IPR011989 -
Aev08g0401 358 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 103 145 IPR000225 GO:0005515
Aev08g0401 358 Gene3D - 200 340 IPR011989 -
Aev08g0401 358 SUPERFAMILY ARM repeat 60 336 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0401 Aev-Chr8 2218824 2220699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0401 63 345 U-box Gene Family AT2G23140 49.823 4.07e-84 266
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0905 07 6385484 6388834 Aev08g0401 08 2218824 2220699 PCT