Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0372 ATGGCGCCCTACCATCACCAACAGGACTGCTCCAAATTCCTTCTGGATGCTCTGTACTGCTCGGAGGAACGCTGGGAGGAACAAGTATTCGAAGATGGAGACGGTGAAACAGAGCAAGCTGTGTTAGATGAGTGTGGTAGCACAGGGACAGTAATAAACACTGCGCCTCCTGTGCTGTTAGAACAGGACATGTTGTGGGACGATGATGAGCTTAAATCTTTGCTTTCTAAACAACAAGAGAACCCGTTGTGCACGTGCTTGGAGGGAAACAGGGAGTTGGGGTGCGCGCGGAGAGAAGCGGTGGAGTGGATGATGAAAGTGAATGCGCATTACTCCTTCTCTGCTCTCACCGCTGTTCTTGCTGTTAACTACCTTGACAGGTTCCTATTCAGCTTCTGCTTTCAGAATGGGAAGCCATGGATGACTCAGCTTGCTGCTGTTGCCTGCATCTCACTCGCTGCCAAGGTTGAAGAAATCCATGTTCCCCTTCTGCTGGACCTCCAAGTTGAAGACAGTAAATATGTTTTCGAGGCAAAAACGATTAAAAGGATGGAGCTTTTGGTGCTTTCCACTCTTGGGTGGAAGATGAATCCAGCAACCCCTCTCTCCTTTATTGATTATATCACGAGGAGACTTGGATTGAAGGATTATCTCTCTTGGGAGTTTCTCCGGAGATGCGAAGGCCTTCTTCTCTCTAACATTGCCGATTCCAGGTTTATGAGTTTCCTTCCTTCTGTGTTGGCAACTGCAACTATGATGCACGTTATCAATAGCGTGGAGCCTCGCCTTGGTGTTGAATACCAAGACCAGTTCCTAAGCATTCTTGGAATCAACAAGGACAAGGTGGATGAATGCTTGAAGCTCATGTTGGAAGTGTGGTCAGGGTACGACAACCAAGAGAGGAAGCAACAACAATGCAGCAACAAACGCAAGTTTGGGTTTGGGTTTGGGTCATCAGTTCCCGGTAGCCCAAACGGCGTGATTGATGTGTCGTTTAGCTGTGACAGCTCCAACGACTCATGGGCTGTGACTGCTTCTGTCTCATCCTCACCGGAACCATTGTCCAAGAAGGCCAAGACTCTTCTAAACCCTCCCAATTCGGACCATTTTATTAGTATTATTCCTCGCTAG 1131 0.481 MAPYHHQQDCSKFLLDALYCSEERWEEQVFEDGDGETEQAVLDECGSTGTVINTAPPVLLEQDMLWDDDELKSLLSKQQENPLCTCLEGNRELGCARREAVEWMMKVNAHYSFSALTAVLAVNYLDRFLFSFCFQNGKPWMTQLAAVACISLAAKVEEIHVPLLLDLQVEDSKYVFEAKTIKRMELLVLSTLGWKMNPATPLSFIDYITRRLGLKDYLSWEFLRRCEGLLLSNIADSRFMSFLPSVLATATMMHVINSVEPRLGVEYQDQFLSILGINKDKVDECLKLMLEVWSGYDNQERKQQQCSNKRKFGFGFGSSVPGSPNGVIDVSFSCDSSNDSWAVTASVSSSPEPLSKKAKTLLNPPNSDHFISIIPR* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0372 376 PANTHER CYCLIN D3.1 PROTEIN 11 358 - -
Aev08g0372 376 SUPERFAMILY Cyclin-like 65 197 IPR036915 -
Aev08g0372 376 Gene3D - 198 287 - -
Aev08g0372 376 Pfam Cyclin, C-terminal domain 200 309 IPR004367 -
Aev08g0372 376 SMART Cyclin_C_2 199 323 IPR004367 -
Aev08g0372 376 SMART cyclin_7 102 190 IPR013763 -
Aev08g0372 376 Gene3D - 95 197 - -
Aev08g0372 376 SUPERFAMILY Cyclin-like 182 306 IPR036915 -
Aev08g0372 376 PANTHER CYCLINS 11 358 IPR039361 -
Aev08g0372 376 CDD CYCLIN 97 189 IPR013763 -
Aev08g0372 376 Pfam Cyclin, N-terminal domain 95 197 IPR006671 -
Aev08g0372 376 ProSitePatterns Cyclins signature. 97 128 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0372 Aev-Chr8 2032808 2034244 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0372 6 292 Core Cell Cycle Gene Families AT4G34160 51.220 8.96e-97 291
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0372 08 2032808 2034244 Aev05g0679 05 4715218 4716568 ECH
Aev08g0372 08 2032808 2034244 Aev01g0536 01 4837938 4839438 ECH
Aev08g0372 08 2032808 2034244 Aev09g2522 09 26812481 26814117 ECH
Aev08g0372 08 2032808 2034244 Aev08g0372 08 2032808 2034244 ECH
Aev07g0883 07 6117176 6119634 Aev08g0372 08 2032808 2034244 PCT