Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0370 ATGGGTCCCAGTAGATCGGGCATGGCCATCGTGGTGTTCATGGTCTTAACGGTGTCCCAGGCCTTGGACATGTCGATCATCTCGTACGACAGAGCCCACGGGTCATGGAGGAGTGACGAGGAAGTAATGGCATTGTACGAGGAGTGGCTTGTGAGGCAGGGCAAGGTGTACAACGCCCTGGGCGAGAAGGAGAAGAGGTTCGAGATCTTCAAGGACAACCTCCGGTTCATCGACGACCACAACGCAGAGAACCGGACCTACAAGCTTGCCTTGAACCGGTTCGCGGATCTTACGAACCAGGAGTACAGAGCCAAGTACCTCGGAGCCAGGATTGATCGTAGCAGGAGATTGGCCAAGGCCATGACCAGGAGCAATCGATACGCACCACGTGTCGGTGACAAGTTACCGGAGTCCGTTGATTGGAGGAAAGAGGGTGCTGTCGTCGAAGTCAAAGATCAAGGGAGTTGCGGGAGTTGCTGGGCATTTTCAACAATAGCTGCGGTGGAAGGGATCAACAAGATAGTAACAGGAGATCTAATTTCACTATCGGAGCAAGAACTTGTGGACTGTGACAGGACAATCAATGCAGGATGCGATGGTGGACTTATGGACTACGCCTTTGAGTTCATCATCAACAATGGTGGAATTGACAGTGAAGAGGATTACCCTTACCGTGGTGTTGATGGGAAATGTGACGAAAATAGGAAGAATGCGAAAGTTGTTTCGATTGATGACTACGAAGATGTTCCTACCAACAACGAGTTAGCCTTGAAGAAGGCTGTTGCAAATCAGCCAGTGAGCGTTGCTATTGAAGCAGGTGGCAAGGCTTTCCAGTTCTATGATTCGGGTATATTTACGGGAAAATGTGGGACGTCATTAGACCATGGTGTTACTGCTGTTGGGTATGGTACAGAAAAAGGTAAAGACTATTGGATCGTGAAGAATTCATGGGGTAAGACCTGGGGTGAAGCAGGGTACATCAGAATGGAACGTAATGTGGCGGCCAAATCAGGCAAGTGTGGAATTGCAATTGAGCCCTCATACCCCATAAAGAAAGGGCCAAATCCCCCAAATCCAGGACCATCTCCACCTTCACCTGTAAAGCCACCATCTGTTTGTGATGACTACTTTAGCTGCCCTGTGGGCGACACTTGCTGCTGCGTTTTCCAGTTGGGAAGGAGTTGCTATGAGTGGGGGTGCTGTCCTCTTGAGGCAGCCACTTGCTGTGAAGATTTCTTAACTTGTTGCCCTCATGATTATCCCATCTGTGACATTTACAGAGGAACATGTAAAACGAGCGCTAATAATCCATTTGGAGTGAAGGCATTGAAAAGAACTCCAGCTAAACCCCACTGGGCTTTTGCAGCTGGGAAGAATTAA 1380 0.492 MGPSRSGMAIVVFMVLTVSQALDMSIISYDRAHGSWRSDEEVMALYEEWLVRQGKVYNALGEKEKRFEIFKDNLRFIDDHNAENRTYKLALNRFADLTNQEYRAKYLGARIDRSRRLAKAMTRSNRYAPRVGDKLPESVDWRKEGAVVEVKDQGSCGSCWAFSTIAAVEGINKIVTGDLISLSEQELVDCDRTINAGCDGGLMDYAFEFIINNGGIDSEEDYPYRGVDGKCDENRKNAKVVSIDDYEDVPTNNELALKKAVANQPVSVAIEAGGKAFQFYDSGIFTGKCGTSLDHGVTAVGYGTEKGKDYWIVKNSWGKTWGEAGYIRMERNVAAKSGKCGIAIEPSYPIKKGPNPPNPGPSPPSPVKPPSVCDDYFSCPVGDTCCCVFQLGRSCYEWGCCPLEAATCCEDFLTCCPHDYPICDIYRGTCKTSANNPFGVKALKRTPAKPHWAFAAGKN* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0370 459 PRINTS Papain cysteine protease (C1) family signature 153 168 IPR000668 GO:0006508|GO:0008234
Aev08g0370 459 PRINTS Papain cysteine protease (C1) family signature 295 305 IPR000668 GO:0006508|GO:0008234
Aev08g0370 459 PRINTS Papain cysteine protease (C1) family signature 310 316 IPR000668 GO:0006508|GO:0008234
Aev08g0370 459 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 293 303 IPR025660 -
Aev08g0370 459 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 29 379 - -
Aev08g0370 459 CDD Peptidase_C1A 136 349 IPR039417 -
Aev08g0370 459 Pfam Granulin 384 431 IPR000118 -
Aev08g0370 459 SMART GRAN_2 373 430 IPR000118 -
Aev08g0370 459 SUPERFAMILY Granulin repeat 370 404 - -
Aev08g0370 459 SMART Inhibitor_I29_2 46 102 IPR013201 -
Aev08g0370 459 Gene3D Granulin 370 433 IPR037277 -
Aev08g0370 459 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 153 164 IPR000169 -
Aev08g0370 459 PANTHER CYSTEINE PROTEASE 29 379 - -
Aev08g0370 459 SMART pept_c1 135 350 IPR000668 GO:0006508|GO:0008234
Aev08g0370 459 Pfam Cathepsin propeptide inhibitor domain (I29) 46 102 IPR013201 -
Aev08g0370 459 Pfam Papain family cysteine protease 135 350 IPR000668 GO:0006508|GO:0008234
Aev08g0370 459 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 310 329 IPR025661 -
Aev08g0370 459 Gene3D Cysteine proteinases 24 352 - -
Aev08g0370 459 SUPERFAMILY Cysteine proteinases 39 350 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0370 Aev-Chr8 2018972 2022039 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0878 07 6069558 6074575 Aev08g0370 08 2018972 2022039 PCT