Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0360 ATGCAAGGGCGCAGAGGTACGATTGGTTCCATGCCTGAAACCTTAGAATTTGATCGTGGATCTACATCAAGTGATGCTACTGTGGATCAGCAGGATTACTGGGCCAATCTACAGAATCCTGGAGAAAATGAAACACCTGAATATTTACTGTCTCCTGGTGATATAAATACATCTTCTGTGAATTCCGTAAGCCATGAATGGCAAAATTCAAGAGGATGGAGCTTAGGCGAGCCAAGTTCTAGTAATACAGCAAGCAGGATTAACAATAATGAGCAGATAAGAGAAACTGGATGGTCATCATCAGTAAGTGTTGGTAACTTAGCTGATCCAAGACTAGAAGAGAGGTGCCTTGAACCAACCAATGCCGTTTCACTGGACAATGTCAATACAGGTTCTATGCATATCTGCAGCTCAAACTCTCATTCAACATTCCAAAATCTAAACTTCAATGCAGGTTTAGTAGACAGTAGCATAGACAATAATCAACAATCAGAGCACACTCACTTGCACAAGTCTAGTGGACCAGTAAGTGAGTGTATTCCACCTGATGTTGGCTCTGGTTCTTCTTTGCTTCCTTCTGAAAATAGTGGTTTGTTGGTAGAAGAGACTACTCGCCGTGTATCTTGTAAAAGGAAGGTTGTTGACGGAAATGTTGGACAACCTTCAGATGGTGGAAGTTGTAGCTACACTCAGCATACAGATGGTAGTGCTTGGCGCACTCTTCCTGCTCAAGATAATTTCGGGAGCAATGTAAGCAGATATGTTTCCTCAGAACAGATAAACTCAAGACTTGGACTGGGTATGGGGAATGAAGCATCTAATAGTGCTTCTGATTCAAATGTTGTTGGAAGCTCAGTAAGCTTCCACAGGAATTTGCGTTTGAGGATAAATCATTCAAATGAACAAAGTTCTATTCCTCCCACTGCGTTTTCAACTGGGAATGTGATAAGGCATTCTGGTGTTTCTTCATCCACTCCTGTGCCTCAAAGTATTCATCCTGTTAATAGTTCTCTTAACTTGAGGTCAGCACCGCCATTAAATTTGATTACTCCAAGCCAGCCACCTGTAGTCCATGTTCCTCCTCCATCAAGGAGTAGACAATCAGTTAGATGGAGCAGTAGTACTAGCTCACTAATTGCTCGTCAATCAAACTCAATTATATCTGCAAACAGTGATAATCTACACCACCAGGAAGCGAGCTCAAGAACAATATCTTCAAATATTTTAGAAGACCACAATTTGGAACCTAGTAACAATTTAAGAAGTTCAGTTCAAGATCCAACATTTAGGGCTTCAAGTTCAAGTAATTTGAGTATTTTAGGAAATGTTGCTTCTTCATTCCTGACTGGATCAAATTCAGCAGCTACTAATCCTTCAGCAGCTAGAAATCATCCACAACATCCCCCTAGGTTATCAGAGTATGTACGTCGCTCCTTGTTTTCTCCTGGCTCTGATGTTACTGGCATCCCAAGCAATAACCATTCATCATTTTGCTCTGGTCCTTCTGCATCTGAATCCAGGGCGTTATCATCTGGGGCCCACCCAAGATCATCTTCATGGTTGGAGAGGCAAGGTGATAGTGGCTTTGCACCTTATTCATTACGAACTTTGGCTGGGGTAAATGAAGGAAGTAGTAGGCTTGTGTCTGAGCTCCGCAATGTTTTGGGCCTAATGCGTAGGGGTGGGAACTTGCGATTTGAGGATGTTTTGATCCTCGACCAATCAGTATTTTCTGGAATGGCTCATATTCATGATCGGCACAGGAACATGAGACTTGATGTTGATAACATGTCTTACGAGGAGTTATTGGCTCTGGAGGAGCGCATAGGAAACGTGAGTACTGGATTGAGTGAGGAAACCGTACTGAAACTTCTGAAACAGAAAAAGTATTCAGTTGAAACAGGACCTCAGCTTGATGCAGAACCCTGCTGTGTTTGTCAGGAGGATTATGGTGAAGGTGATGACGTCGGAACACTCGACTGTGGGCATGATTTCCATAGCGACTGCATTAAACAGTGGCTAATTCAAAAAAATTTGTGCCCAATTTGCAAGACAACCGGTTTGGCAACATGA 2073 0.425 MQGRRGTIGSMPETLEFDRGSTSSDATVDQQDYWANLQNPGENETPEYLLSPGDINTSSVNSVSHEWQNSRGWSLGEPSSSNTASRINNNEQIRETGWSSSVSVGNLADPRLEERCLEPTNAVSLDNVNTGSMHICSSNSHSTFQNLNFNAGLVDSSIDNNQQSEHTHLHKSSGPVSECIPPDVGSGSSLLPSENSGLLVEETTRRVSCKRKVVDGNVGQPSDGGSCSYTQHTDGSAWRTLPAQDNFGSNVSRYVSSEQINSRLGLGMGNEASNSASDSNVVGSSVSFHRNLRLRINHSNEQSSIPPTAFSTGNVIRHSGVSSSTPVPQSIHPVNSSLNLRSAPPLNLITPSQPPVVHVPPPSRSRQSVRWSSSTSSLIARQSNSIISANSDNLHHQEASSRTISSNILEDHNLEPSNNLRSSVQDPTFRASSSSNLSILGNVASSFLTGSNSAATNPSAARNHPQHPPRLSEYVRRSLFSPGSDVTGIPSNNHSSFCSGPSASESRALSSGAHPRSSSWLERQGDSGFAPYSLRTLAGVNEGSSRLVSELRNVLGLMRRGGNLRFEDVLILDQSVFSGMAHIHDRHRNMRLDVDNMSYEELLALEERIGNVSTGLSEETVLKLLKQKKYSVETGPQLDAEPCCVCQEDYGEGDDVGTLDCGHDFHSDCIKQWLIQKNLCPICKTTGLAT* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0360 690 MobiDBLite consensus disorder prediction 16 47 - -
Aev08g0360 690 MobiDBLite consensus disorder prediction 1 47 - -
Aev08g0360 690 Pfam Ring finger domain 643 684 IPR001841 -
Aev08g0360 690 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE ISOFORM X1 1 689 - -
Aev08g0360 690 SMART ring_2 643 683 IPR001841 -
Aev08g0360 690 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 689 IPR045191 GO:0061630
Aev08g0360 690 MobiDBLite consensus disorder prediction 351 375 - -
Aev08g0360 690 CDD RING-H2_TTC3 642 684 - -
Aev08g0360 690 MobiDBLite consensus disorder prediction 484 522 - -
Aev08g0360 690 SUPERFAMILY RING/U-box 642 686 - -
Aev08g0360 690 MobiDBLite consensus disorder prediction 413 432 - -
Aev08g0360 690 ProSiteProfiles Zinc finger RING-type profile. 643 684 IPR001841 -
Aev08g0360 690 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 606 687 IPR013083 -
Aev08g0360 690 MobiDBLite consensus disorder prediction 482 522 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0360 Aev-Chr8 1944448 1948513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0360 356 690 C3H Transcription Factor Family AT2G15530 41.758 7.18e-64 223
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0861 07 5891127 5895091 Aev08g0360 08 1944448 1948513 PCT