Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0340 ATGTCTAATCGTGGTGAACACCAAATGGTTCCTCTTTCGGTGCTTCTGAAGCGTGAATTGTTGAAGGAGAAGATTGAGAAACCAGAGATTGTACACGGCCAAGCCAGCCAGAGCAAGAAAGGAGAGGATTTCACGCTGCTCAAGACCGAATGCCAAAGGGTCGTCGGAGATGGGGTCTCCACATATTCCGTTTTTGGGTTATTTGATGGACACAATGGATCTGCTGCTGCCATTTATGCCAAGGAGAATCTTCTAAACAATGTTTTAAGTGCAATTCCTTCAGATCTTAACAGAGATGAGTGGGTAGCAGCATTGCCTAGGGCTTTGGTTGCAGGCTTCGTGAAAACTGATAAAGATTTTCAAGAGAAAGCACAAACATCGGGAACAACTGTAACTTTTGCGATCATAGAAGGACTGGTTGTAACAGTTGCATCGGTTGGTGATTCGCGTTGCATACTTGAACCTTCTGAAGGTGGGATTCATTACTTATCAGCAGATCATAGACTTGAAAGCAATGCAGAGGAGAGGGTGCGCATAACCTGTTGTGGGGGTGAGGTTGGTCGGCTAAATACTGGTGGAGGAGCAGAGGTTGGTCCTTTGAGATGTTGGCCTGGTGGCTTGTGTCTTTCGCGATCCATTGGTGATATGGATGTTGGTGAATTTATTGTGCCTGTACCACATGTAAAGCAAGTGAAGCTATCTAGTGCGGGAGGCAGGCTCATTATCAGCAGTGATGGTGTCTGGGATGCTCTAACTCCAGAAATGGCCCTAGATTGTTGTCGTGGCATGTCAGCAGAGGCTGCAGCACCACATCTTGTGAATGAAGCTTTACAAGCAAAGGGTCTACGAGACGATACAACCTGCATCATTATTGATATATTACCCCAGGAGAAGCCACCTACTTCTAGATCAACACAAAAGAAACATGTAAAAGGAATGCTTAAGGCCATCTTCTGTAAAAAGTCTTCTGGATCATCGTCTCATGTTGAGAAAGAATATGTCGAGCCAGATATCGTGCGGGAGCTCTACGAGGACGGCTCTGCTATGCTTTCAGAGAGGTTAGATACAAAGTATCCACTCTGCAACATGTTCAAGTTGTTTGTATGTGCCGTGTGTCAAGTAGAGATCAAACCAGGAGAGGGTATTTCAATACATGCAGATAAGCCTAACACAGGAAAATTGCGTTCCTGGGAAGGACCTTTCCTTTGCTCTAGTTGCCAAGAGAAGAAAGAAGCCATGGAAGGGAAGCTTACATCGGGTAGACTTAGCAGCGGAAGTGACTAA 1284 0.4548 MSNRGEHQMVPLSVLLKRELLKEKIEKPEIVHGQASQSKKGEDFTLLKTECQRVVGDGVSTYSVFGLFDGHNGSAAAIYAKENLLNNVLSAIPSDLNRDEWVAALPRALVAGFVKTDKDFQEKAQTSGTTVTFAIIEGLVVTVASVGDSRCILEPSEGGIHYLSADHRLESNAEERVRITCCGGEVGRLNTGGGAEVGPLRCWPGGLCLSRSIGDMDVGEFIVPVPHVKQVKLSSAGGRLIISSDGVWDALTPEMALDCCRGMSAEAAAPHLVNEALQAKGLRDDTTCIIIDILPQEKPPTSRSTQKKHVKGMLKAIFCKKSSGSSSHVEKEYVEPDIVRELYEDGSAMLSERLDTKYPLCNMFKLFVCAVCQVEIKPGEGISIHADKPNTGKLRSWEGPFLCSSCQEKKEAMEGKLTSGRLSSGSD* 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0340 427 CDD PP2Cc 39 293 IPR001932 -
Aev08g0340 427 Pfam Protein phosphatase 2C 53 283 IPR001932 -
Aev08g0340 427 Gene3D - 31 301 IPR036457 -
Aev08g0340 427 PANTHER CATALYTIC/PROTEIN PHOSPHATASE TYPE 2C 2 423 - -
Aev08g0340 427 SMART PP2C_4 21 291 IPR001932 -
Aev08g0340 427 PANTHER ALPHABET, ISOFORM E-RELATED 2 423 - -
Aev08g0340 427 SUPERFAMILY PP2C-like 37 293 IPR036457 -
Aev08g0340 427 ProSiteProfiles PPM-type phosphatase domain profile. 24 293 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0340 Aev-Chr8 1832983 1835962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev08g0340 1 427 PP2C-type Phosphatase Gene Family AT1G47380 77.336 0.0 696
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0340 08 1832983 1835962 Aev08g0340 08 1832983 1835962 ECH
Aev07g0839 07 5671198 5675620 Aev08g0340 08 1832983 1835962 PCT