Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0316 ATGCAAAACTTTGCAGCTATGGCACATCCAGAGCTGTCATTAAACATTAGCCCACCTTTTCCATCAGAACCCAAAGAAGTGGTGATGGGAATTAGCTGCTTAACTAGAAAAGCGCTTTACAACGATATGTGCTCCTCAACTACTTCTGATTCCGGTAGCAGTGAAAGTGATTTAAGCCATGAAAATAATAATGGCCTTTTATTCCATAATCATCATCATCGTGTGCCGGCCACACTGAGCTTAGTCTCTGGACCCGCAAATTTGATTAATAATCCACACCTCCATCATCAAGTACAAGGCCTCTCAAGAAACTTCAACAACCACATGCACAATAATTACCAACCTCACATCCATTGCCGCGATTTCAAACGAAATGGTACGAGACTCGTCAGCGGTGTGAAGAGAAGCGTAAGAGCTCCCAGGATGAGATGGACTACCACCCTCCATGCCCATTTTGTTCACGCCGTTCAGCTTCTTGGCGGCCATGAAAGGGCAACTCCAAAGTCAGTGTTAGAGTTAATGAATGTTAAGGATCTAACCCTAGCTCACGTCAAGAGCCACTTGCAGATGTATAGAACAGTGAAGAGCACTGACAAAGGCACAGGGCGTCATGATGGGCACACAGATATGGGCTTAAGGCTGAGGCAATTAGGAGGACAACATCAAGGGGTCGTGAATCCGCATGGAGGAGGAGGAGAAGCACCACCACCACTCTCACCTAATTCCCATTTGCCAAAACCCCACAGGGCATTATGGCAATCAGCAATGGAGACAAATAATGGGAATATTACTAGACAAGAATCCGAAATCAGCTTGATGTATTCTCATTCTCATAATCTACAAGGACGTGAAATGATGGTGAATCATAGAGGCTTATTATCAAATAATTGCATGAAGGAGAGGCTGGTGGATTGTTCTAGCCGCTCTTTGTCACATTCGGTGGTTGACCTGGAATTCACACTTGGAAGAAAGCCCGCCTTGCAAACGGACCAGGGCGAATCATCAAGAGAATTAACTCTTCTCAAGTGTTAA 1032 0.4496 MQNFAAMAHPELSLNISPPFPSEPKEVVMGISCLTRKALYNDMCSSTTSDSGSSESDLSHENNNGLLFHNHHHRVPATLSLVSGPANLINNPHLHHQVQGLSRNFNNHMHNNYQPHIHCRDFKRNGTRLVSGVKRSVRAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKSTDKGTGRHDGHTDMGLRLRQLGGQHQGVVNPHGGGGEAPPPLSPNSHLPKPHRALWQSAMETNNGNITRQESEISLMYSHSHNLQGREMMVNHRGLLSNNCMKERLVDCSSRSLSHSVVDLEFTLGRKPALQTDQGESSRELTLLKC* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0316 343 MobiDBLite consensus disorder prediction 45 65 - -
Aev08g0316 343 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 6 343 IPR044847 GO:0000976|GO:0006355|GO:0010158
Aev08g0316 343 Gene3D - 139 196 - -
Aev08g0316 343 SUPERFAMILY Homeodomain-like 137 194 IPR009057 -
Aev08g0316 343 PANTHER MYB-LIKE DNA-BINDING DOMAIN, SHAQKYF CLASS PROTEIN 6 343 - -
Aev08g0316 343 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 140 193 IPR006447 GO:0003677
Aev08g0316 343 Pfam Myb-like DNA-binding domain 141 192 IPR001005 -
Aev08g0316 343 MobiDBLite consensus disorder prediction 221 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0316 Aev-Chr8 1704752 1708290 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Aev08g0316 Myb_DNA-binding 1.5e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0316 08 1704752 1708290 Aev08g0316 08 1704752 1708290 ECH
Aev07g0805 07 5415412 5420115 Aev08g0316 08 1704752 1708290 PCT