Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0305 ATGGCGAAATCGAGCGCTGACGATGCTGAGCTCCGGCGAGCATGCGAGGCTGCGATTGAAGGCACGAAGCAGAAGATCGTGCTATCGATCCGAGTTGCCAAAACTCACGGCACCTGGGGAAAAACCGCCAAACTTGGTCGCCAAATGGCTAAGCCTAGGGTCCTCGCTCTCTCCACAAAAGCGAAAGGTCAGAGGACAAAGGCATTTCTTCGGGTTTTAAAATATTCAAATGGAGGAGTTCTCGAGCCTGCTAAGATATACAAACTGAAGCACCTCTCAAAAGTGGAAGTTGTAACAGATGATCCCAGTGGATGTTCGTTTACACTGGGATTTGACAACCTCAGAAGCCAGAGTGTGGCTCCTCCACAGTGGACAATGCGCAATGTTGATGACAGGAATCGCCTCCTACTTACCATCTTAAATATCTGCAAAGATGTTCTGGGTCGCCTTCCTAAGGTTGTCGGTATTGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACATCCACAGTTTCCACCACTCAAACTCGCGAACAGGAAGATGGTCCTGTTGAATCTGCTATGATCGAAACAGAATTGAATGTCAATGTTGAAAAGGAACTTGTCTCCCAGGCAGAGGAAGAGGATATGGAAGCTCTTCTGGGAACTTATGTCATGGGTGTTGGTGAAGCAGAGGTATTTTCTGAAAGATTGAAAAGAGAGCTCCAAGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAACTGAACCTTTGATTGATGAGGTGTTGCGAGGGATTGAAGCCGCAACAAATTGTGTGGAAGACATGGACGAGTGGTTAGGCATGTTCAATGTGAAACTTCGACACATGAGGGAGGATATTGAATCAATCGAAACCCGTAATAACAAGTTGGAATTGCAATCAGTAAATAACAAACATCTCATTGAAGAGCTTGATAAGCTTCTTGAGCGATTGAGTATCCCTCCCAAGTATTCAGCATTTTTGACAGGAGATTCATTTGAAGAAGCACAAATGCTTCACAATATGGAAGCATGTGAGTGGTTGACCAGTGCCATGCGTGGTCTTGATGCAACTAATGTAGATCCTATGTATGCAAATATGAGAGCTGTTAAAGAGAAGCGAGGAGAACTTCTAATATTAAAATCCACTTTTATCGAGAGAGCTTCAGCATACTTGACAAGATATTTTGCTAGTTTTGTGGACTTCATGCTAAATGATAAAAATTATTTTTCTCAGCGGGGACAGTTGAAAAGGCCAGATCATGCTGACCTGCGGTACAAGTGCAGGACATATGCACGCTTTCTGCAACATTTAAAGATGCTCGATAAGAATAGCTTGGGTACATTGAGAAGATCTTATTGCAGTTCTCTGAACTTGCTTCTTCGCAGGGAGGTCCGTGAGTTCTCCAATGAACTTCGTGCCAGTATTAAAGCTCCTAGAAACGTAGCTGTTTGGCTTGATGGGCCAGTTACTGGTCAGAATGTAAATTCTGCTGACACTTCTGCAGTTTCTGATGCATATGCAAAGATGCTGACAATTTTTATTCCACTTCTGGTGGATGAGAGCTCTTTTTTTGCACACTTCATGTGCTTTGAAGTTTCTACACTTGTTCCTCCAGGAGTTAATGGTAATGAAGATGATAATGATGATTTGGGAATTATGGACATTGACAAGAATGAAAGTTTTTCTGGTAATAATGCTGCAAACCTTGCAGCTTTAAATGAATCACTTCGGGATTTGCTTGATGGAATGCAAGAAGACTTCTATGCTGTTGTGGATTGGGCATTCAAGATTGATCCTTTATGCTGCATATCAATGCATGGAATAACAGAGCGCTATCTCTCTAGTCAGAAAACTGATGCAGCGGGATTTGTACTACTTTTGCTTGGTGACCTGGAGGATCGGATATCTATGCAATTCAGCCGTTATATTGATGAAGCTTGCCATCATATTGAAAAATTCGAGCGCAATGCTCGCCAAATGGGTGTTCTACCCTACATTCCCAGATTTGCAATGCTTGCGACTAAGATGGAGCACTACATCACTGGACAGTCGAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGCATCATGTTTGTAACTTTGGAAAAAATGGCACAAACAGAGCCAAAGTATGCAGATATTTTTCTTTTTGAGAACTATGCCGCCTTTCAGAATAGTTTGTATGAACTTGCCAATGTTGTGCCCACTTTGACCAAGTTTTATCATCAAGCTAGTGAAGCCTATGAGCAAGCTTGCACACGCCATATTAGCATGATTATTTACTATCAATTTGAACGCCTTTTCCAGTTCGCTCGAAGGATTGAGGACATGATATTCAATAATATTCCACCCGAAGAGATTCCTTACCAGCTTGGAACATCAAAAGTGGATCTACGGAAGACGCTAAAATCCAGTTTATCAGGGGTGGACAAGTCCATTACAGCGATGTATAAGAAATTGCAGAAGAACTTGACTTCGGAAGAACTCTTACCTGCCTTATGGGATAAATGCAAGAAGGACTTCCTTGATAAGTACGAAAGTTTTGCCCAACTGGTCGCCAAGATCTACCCTGCCGAGTCAATCCCTTCTGTGACAGAGATGAGAGACCTTTTAGCTTCCATGTAA 2640 0.4258 MAKSSADDAELRRACEAAIEGTKQKIVLSIRVAKTHGTWGKTAKLGRQMAKPRVLALSTKAKGQRTKAFLRVLKYSNGGVLEPAKIYKLKHLSKVEVVTDDPSGCSFTLGFDNLRSQSVAPPQWTMRNVDDRNRLLLTILNICKDVLGRLPKVVGIDVVEMALWAKENTSTVSTTQTREQEDGPVESAMIETELNVNVEKELVSQAEEEDMEALLGTYVMGVGEAEVFSERLKRELQALEAANVHAILETEPLIDEVLRGIEAATNCVEDMDEWLGMFNVKLRHMREDIESIETRNNKLELQSVNNKHLIEELDKLLERLSIPPKYSAFLTGDSFEEAQMLHNMEACEWLTSAMRGLDATNVDPMYANMRAVKEKRGELLILKSTFIERASAYLTRYFASFVDFMLNDKNYFSQRGQLKRPDHADLRYKCRTYARFLQHLKMLDKNSLGTLRRSYCSSLNLLLRREVREFSNELRASIKAPRNVAVWLDGPVTGQNVNSADTSAVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVSTLVPPGVNGNEDDNDDLGIMDIDKNESFSGNNAANLAALNESLRDLLDGMQEDFYAVVDWAFKIDPLCCISMHGITERYLSSQKTDAAGFVLLLLGDLEDRISMQFSRYIDEACHHIEKFERNARQMGVLPYIPRFAMLATKMEHYITGQSRDLVDQAYTKFVSIMFVTLEKMAQTEPKYADIFLFENYAAFQNSLYELANVVPTLTKFYHQASEAYEQACTRHISMIIYYQFERLFQFARRIEDMIFNNIPPEEIPYQLGTSKVDLRKTLKSSLSGVDKSITAMYKKLQKNLTSEELLPALWDKCKKDFLDKYESFAQLVAKIYPAESIPSVTEMRDLLASM* 880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0305 879 Coils Coil 282 319 - -
Aev08g0305 879 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 1 879 - -
Aev08g0305 879 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 49 144 IPR028258 -
Aev08g0305 879 SMART Sec3_PIP2_bind_2 48 146 IPR028258 -
Aev08g0305 879 Coils Coil 189 209 - -
Aev08g0305 879 Coils Coil 569 589 - -
Aev08g0305 879 Pfam Exocyst complex component Sec3 225 479 IPR019160 GO:0000145|GO:0006887
Aev08g0305 879 Pfam Exocyst complex component Sec3 505 862 IPR019160 GO:0000145|GO:0006887
Aev08g0305 879 Coils Coil 229 249 - -
Aev08g0305 879 PANTHER SEC3/SYNTAXIN-RELATED 1 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0305 Aev-Chr8 1653202 1666199 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0305 08 1653202 1666199 Aev08g0305 08 1653202 1666199 ECH
Aev07g0800 07 5353882 5362014 Aev08g0305 08 1653202 1666199 PCT