Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0261 ATGGATTCAACTTGTGTAGCCATGAGTGCGAACCTAGTTAGAGCTAGAGAGGGAGTTGGAAGACACAGAGGAACTGATTTCTGGGGTGAGAGTACAAGGGACAGAAGCCTAAACAGAAGATCGTCGAGTATTGGGTTTTGCAAGAGAAAAACTTCTCGAACCCTTCTTAGAAACTTTAAGCCAGCAACTGCATGTGCTGTTCTCACATCAGATGTTAACGAAGAGTCCATGGCATTCAAGGAGGCTTTTGAAACTCCAAAAGCAGACCCAAAAAGTGTAGCTTCCATCATATTGGGTGGAGGTGCTGGAACTCGCCTCTTTCCTCTTACTAGCAGAAGAGCTAAGCCCGCGGTTCCAATAGGAGGGTGTTACAGACTAATAGATATCCCTATGAGCAATTGCATCAACAGTGGCATCAGAAAAATATTCATTCTAACCCAGTTCAACTCTTTTTCCCTCAATCGCCACTTGTCTCGCACATACAATTTTGGAAATGGTGTCAGTTTTGGAGATGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACATCTGGAGAAACAGGGAAGAAATGGTTCCAAGGGACAGCAGATGCTGTTAGGCAATTTATATGGGTTTTTGAGGATGCCAAGAACAAGAATGTTGAGAATATATTGATACTTTCTGGTGATCATCTTTATCGAATGGACTATATGGACTTTGTACAGAGACATATAGACACGAATGCTGATATCACAGTTTCATGTGTACCCATGGATGACAGCCGCGCATCGGACTATGGCCTCATGAAAATCGATAAAACAGGACGGATTACACAGTTTGCAGAAAAACCTAAGGGATCTGATCTGAAAGCAATGCAAGTTGACACCACTGTCCTGGGGTTATCTGCAGAAGAAGCAAAGAAACATCCTTACATTGCATCGATGGGTGTCTACGTGTTCCGAACTGAGACCCTGCTGAAACTTTTAAGGTGGAGCTATTCTACGTGCAATGACTTTGGATCTGAAATTATCCCATCTGCTGTGGGCGACCACAATGTTCAGGCATATTTGTTTAATGACTACTGGGAAGATATTGGAACTATTAAGTCCTTCTTTGATGCAAATTTGGCCCTAACAGAGCAGCCTCCAAAGTTTGAATTCTATGATCCAAAGACACCTTTTTTCACTTCCCCAAGATTCCTACCACCCACTAAAGTAGAAAAATGCAAGATCACAGATGCAATTATTTCTCACGGTTGCTTCTTGAGGGAATGTAGCGTTCAACATTCAATTGTTGGGGTGCGCTCGCGATTAGAGTCTGGTGTGGAGCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGAGACTGAAATTGTATCTATGCGGGCAGAAGGAAAGGTTCCAATCGGTGTGGGAGAAAATACCAAAATCAGGAATTGTATAATAGACAAGAATGCCAAGATAGGAAGAAACGTGATCATTGCAAATACTGATGGTGTTGAAGAAGCAGACAGGCCTAAGGAAGGATTCTACATTAGGTCAGGCATCACAGCTATACTTAAGAATGCTACAATCAAAGATGGATTAGTAATATGA 1581 0.425 MDSTCVAMSANLVRAREGVGRHRGTDFWGESTRDRSLNRRSSSIGFCKRKTSRTLLRNFKPATACAVLTSDVNEESMAFKEAFETPKADPKSVASIILGGGAGTRLFPLTSRRAKPAVPIGGCYRLIDIPMSNCINSGIRKIFILTQFNSFSLNRHLSRTYNFGNGVSFGDGFVEVLAATQTSGETGKKWFQGTADAVRQFIWVFEDAKNKNVENILILSGDHLYRMDYMDFVQRHIDTNADITVSCVPMDDSRASDYGLMKIDKTGRITQFAEKPKGSDLKAMQVDTTVLGLSAEEAKKHPYIASMGVYVFRTETLLKLLRWSYSTCNDFGSEIIPSAVGDHNVQAYLFNDYWEDIGTIKSFFDANLALTEQPPKFEFYDPKTPFFTSPRFLPPTKVEKCKITDAIISHGCFLRECSVQHSIVGVRSRLESGVELQDTMMMGADYYQTETEIVSMRAEGKVPIGVGENTKIRNCIIDKNAKIGRNVIIANTDGVEEADRPKEGFYIRSGITAILKNATIKDGLVI* 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0261 526 SUPERFAMILY Nucleotide-diphospho-sugar transferases 93 487 IPR029044 -
Aev08g0261 526 CDD LbH_G1P_AT_C 394 520 - -
Aev08g0261 526 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE-RELATED 1 526 IPR011831 GO:0005978|GO:0008878
Aev08g0261 526 CDD ADP_Glucose_PP 96 357 - -
Aev08g0261 526 PANTHER GLUCOSE-1-PHOSPHATE ADENYLYLTRANSFERASE LARGE SUBUNIT 3, CHLOROPLASTIC 1 526 - -
Aev08g0261 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 2. 190 198 IPR005836 GO:0005978|GO:0008878
Aev08g0261 526 TIGRFAM glgC: glucose-1-phosphate adenylyltransferase 94 490 IPR011831 GO:0005978|GO:0008878
Aev08g0261 526 Gene3D Hexapeptide repeat proteins 392 526 - -
Aev08g0261 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 3. 305 315 IPR005836 GO:0005978|GO:0008878
Aev08g0261 526 ProSitePatterns ADP-glucose pyrophosphorylase signature 1. 99 118 IPR005836 GO:0005978|GO:0008878
Aev08g0261 526 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 76 391 IPR029044 -
Aev08g0261 526 Pfam Nucleotidyl transferase 95 372 IPR005835 GO:0009058|GO:0016779
Aev08g0261 526 SUPERFAMILY Trimeric LpxA-like enzymes 388 526 IPR011004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0261 Aev-Chr8 1482132 1485391 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0261 08 1482132 1485391 Aev08g0261 08 1482132 1485391 ECH
Aev07g0738 07 4865843 4871005 Aev08g0261 08 1482132 1485391 PCT