Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0252 ATGGCCTCATCCAGTGGAAACTCTTCAACCACCAAATTTCAGAGCTCAGGCTCTGAAGAGGATCTGCAGAATCTGATGGATCAAAGGAAGAACAAGAGAAAGCAATCAAATAGGGAATCAGCAAGGAGATCAAGGATGAGAAAGCAGAGCCACTTGGATGAATTGATGAAGCAGGTGTCTCAGCTCACAAAGGACAACAGTGAAATCCTGAGAAGCATAGAGATAACCACACAGCACTATCTCACTGTTGAGTCTGAGAATTCCGTATTGAGGGCCCAATTGGGGGAACTTGGACAAAGGCTTCAATCACTGAATGATATCATTAGCCTCATCAACTCAACCACTACTGAGGCCTACGAAAGGGATTGTTATCTAACAAGTGCTTCAGCAGCAGCAGCAGAAAGTTTCATCAACCCCATGACCATGAACATGAATATGAATATGAATATGCTCTATCTTAACCAACCAATTTCGGCATCTGCAGATACCATATTTCAGTGGTGA 504 0.4325 MASSSGNSSTTKFQSSGSEEDLQNLMDQRKNKRKQSNRESARRSRMRKQSHLDELMKQVSQLTKDNSEILRSIEITTQHYLTVESENSVLRAQLGELGQRLQSLNDIISLINSTTTEAYERDCYLTSASAAAAESFINPMTMNMNMNMNMLYLNQPISASADTIFQW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0252 167 MobiDBLite consensus disorder prediction 1 52 - -
Aev08g0252 167 SMART brlzneu 25 89 IPR004827 GO:0003700|GO:0006355
Aev08g0252 167 Coils Coil 52 72 - -
Aev08g0252 167 PANTHER BZIP TRANSCRIPTION FACTOR 1 164 - -
Aev08g0252 167 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 32 47 IPR004827 GO:0003700|GO:0006355
Aev08g0252 167 Gene3D - 27 82 - -
Aev08g0252 167 SUPERFAMILY Leucine zipper domain 29 82 IPR046347 GO:0003700|GO:0006355
Aev08g0252 167 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 27 90 IPR004827 GO:0003700|GO:0006355
Aev08g0252 167 CDD bZIP_plant_GBF1 30 80 IPR045314 GO:0003700|GO:0006355
Aev08g0252 167 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 164 - -
Aev08g0252 167 Pfam bZIP transcription factor 29 86 IPR004827 GO:0003700|GO:0006355
Aev08g0252 167 MobiDBLite consensus disorder prediction 1 22 - -
Aev08g0252 167 Coils Coil 19 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0252 Aev-Chr8 1419580 1420083 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev08g0252 bZIP_1 3.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0252 08 1419580 1420083 Aev08g0252 08 1419580 1420083 ECH
Aev07g0729 07 4774911 4776322 Aev08g0252 08 1419580 1420083 ECH
Aev04g3375 04 32499763 32500245 Aev08g0252 08 1419580 1420083 ECH