Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0239 ATGCTCAAGTCTGGCATGGGAACAGAGGAGAGAAAGCAGGTGAAGAAACCTGCACAAGCTAGCTCCAGAAAGGGTTGCATGAGGGGCAAAGGTGGCCCTGAAAATGCAAGTTGCACCTACAAAGGTGTGAGACAGAGGACATGGGGGAAATGGGTTGCTGAAATCCGCGAGCCAAATCGCGGTGCTAGGCTCTGGCTTGGCACGTTCGAGACCTCTCATGAGGCTGCTCTAGCTTACGATGCTGCTGCACGTAAGCTTTATGGCCCTGATGCAAAACTCAATCTACCAGAACACTCTGTGTCTGTGGCTCTGAATTCTCAGTGTCCACAATCCTATGCTACCACCCAGATGGAAAAGCTGCACCAATCTCAAATTCAACAGAACTCAGATATGGTTCCTGCTGCCGCTATCTCCAATTTCAATACTTCTTCCCCTGCAGTTTCCATGGCTTCTCAGCAAGTTGGGGTAGGACCAATTTACACCAGTGACTCCATAGTGTCTCTGCCTCTGGATACCACCACTGCTAATAGTACCAACAGCAACACTAAGGCCTTTGATAATGGCTATGCAAAGCCCATGGAGATTGAGGAGGAGCTTCGTCCCTTTTGGGGGACAATGAATGAGAGTTTCCCAGTGTTGGATGATTCCATTTGGGCAGAAGCTGCCATGTCCCTAGATTTCCCTGTAATTGCAGCAGAGACTGGGATTTATCCAAATGGCAACTTGGCAGATGTGAGTGTTTGGGACACTCCATGGTGCATGTGA 765 0.4928 MLKSGMGTEERKQVKKPAQASSRKGCMRGKGGPENASCTYKGVRQRTWGKWVAEIREPNRGARLWLGTFETSHEAALAYDAAARKLYGPDAKLNLPEHSVSVALNSQCPQSYATTQMEKLHQSQIQQNSDMVPAAAISNFNTSSPAVSMASQQVGVGPIYTSDSIVSLPLDTTTANSTNSNTKAFDNGYAKPMEIEEELRPFWGTMNESFPVLDDSIWAEAAMSLDFPVIAAETGIYPNGNLADVSVWDTPWCM* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0239 254 PRINTS Ethylene responsive element binding protein signature 62 78 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 ProSiteProfiles AP2/ERF domain profile. 39 96 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 7 250 - -
Aev08g0239 254 Gene3D AP2/ERF domain 39 97 IPR036955 GO:0003700|GO:0006355
Aev08g0239 254 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2D-LIKE 7 250 - -
Aev08g0239 254 Pfam AP2 domain 39 88 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 SUPERFAMILY DNA-binding domain 39 96 IPR016177 GO:0003677
Aev08g0239 254 SMART rav1_2 39 102 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 MobiDBLite consensus disorder prediction 1 38 - -
Aev08g0239 254 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
Aev08g0239 254 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0239 Aev-Chr8 1356252 1357016 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev08g0239 AP2 5.9e-15 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev08g0239 08 1356252 1357016 Aev08g0239 08 1356252 1357016 ECH
Aev07g0720 07 4717165 4718049 Aev08g0239 08 1356252 1357016 PCT