Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev08g0062 ATGCCGACGACGACACAAGGAGGAGGAGGAGGGGGTCCCACCAAATGCCAAGACTGTGGGAACCAAGCAAAGAAGGAGTGTGGATACTCAAGGTGCAGAACTTGCTGCAAGAACAAAGGCTTTCACTGCCAAACCCATATCAAGAGCACTTGGATCCCTGTCGATAGAAAACGCCACCGGGATGATCTCTTCCACGCTCATACCTCCTCTAAAAGGCTCAACCACTATTCATATTCAGAGGCATCAGGTAGTGGTGAGGAGTTGAAGTTTCCAGCTGCGACGAGTTCGACGGCGATATTCCGGTGCGTTGAGGTTCGGTCGGTTGATGATACGGTTAACGAAGTCGCCTATCAAACATCAGTGAAGATTGGAGGTCGTGTGTTTAGTGGTCTTCTTTATGATCAACGCCCAGCTGCCCCCCCTCGCCAAACTAGTCTTCTTTATGCTCCTAATAAGGGTCATACTACTACTGCTACTACTACTCTTGATCAGCAACATGTAAATAATACCCCTCATGATGATGGTGAGGGTGCAATTATGGCTCCATTATCATCATCATCAGCCCCTACTGATGCTCCACACGATCATCATGACCCTCATTTTCTGCCTCCTCCTCCTCCTCCTTATCCCTTCCCCCTTTCTTCCTTCAGACCCGGTAGTATGCCATATTTCTCTTACCCAAAATCTTAA 690 0.4841 MPTTTQGGGGGGPTKCQDCGNQAKKECGYSRCRTCCKNKGFHCQTHIKSTWIPVDRKRHRDDLFHAHTSSKRLNHYSYSEASGSGEELKFPAATSSTAIFRCVEVRSVDDTVNEVAYQTSVKIGGRVFSGLLYDQRPAAPPRQTSLLYAPNKGHTTTATTTLDQQHVNNTPHDDGEGAIMAPLSSSSAPTDAPHDHHDPHFLPPPPPPYPFPLSSFRPGSMPYFSYPKS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev08g0062 229 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 10 154 IPR007818 GO:0003700|GO:0006355
Aev08g0062 229 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 89 135 IPR006511 -
Aev08g0062 229 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 15 56 IPR006510 -
Aev08g0062 229 MobiDBLite consensus disorder prediction 148 168 - -
Aev08g0062 229 PANTHER BNAC01G23660D PROTEIN 10 154 - -
Aev08g0062 229 Pfam Domain of unknown function (DUF702) 14 137 - -
Aev08g0062 229 MobiDBLite consensus disorder prediction 142 214 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev08g0062 Aev-Chr8 357046 357993 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev08g0062 DUF702 2.2e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0717 07 4666597 4668471 Aev08g0062 08 357046 357993 PCT