Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g1800 ATGCCAAACCAAAAAAAATCCATTAATTACCACTATACTACTCTCATCTTGTTACTCTTGAATACTGCACTAGTACTCAATAATGTACTTCTTCCCGTGAATTGCAAATCCACAATTGAACCATGTTCAAGCAATGACAAATGCAATGCTCTTCTTGGCTACAAACTTTACACTGACCTCAAAGTCTCAGAAGTAGCTTCAATTTTTCAAATTGACCCAATTTCTCTTCTCACTGCCAATTCAATTGACACCTCTTACCCTAACGTAGAGGAACAAATTCTCCCATCACAGCTCTTCCTTAAGGTCCCAATTACATGTTCATGTATTGATGGGATTCGAAAATCTGTGTCTACCCATTACAGGATTCGACCCTCAGACACAATCTCATTCATTGCGGATTCAATATATGGGGGTTTGGTTTCTGTTGATCAGCTAAGAGAGGCTAATTCTATAGATGACTCTTCTTCTTCTGTTATCGATGTGGGACAGAGGCTTGTGGTGCCACTTCCTTGTACTTGCTTCAACGGTAGTGATAACTCTCTGCCTGCTATTTACTTGTCACATGTGGTTCAGGAGGTTGAAAATTTGGCAACAATTGCTGCTAGATACTTCACAACCGTTACTGACTTGATGAATGTTAATTCCATGGGGACCATAGATATCTCTGATGGGGATATTCTTGCAGTTCCAATACCCGCTTGCGCATCAAAATTTCCAAAACAAGCCTCGGATTTTGGTTTGCTTGTCCCTAATGGAAGCTATGCTATTTCAGCCAGTCACTGTGTGCAATGTAGCTGTGGACCACAAAATCTAGATTTGTACTGTATGCCGGCTTCTCTAGCAGTCTCTTGCTCCAGCTTGCAATGTAAAAGCAGTAACCTTATGCTTGGAGATGTTACCGTGCAACCTACCAGTGGTGGTTGCAATGTTACTTCTTGCAATTATCATGGTTTTGTTAATAGCACCATTGTAACAAGGTTGTCCTCATCTCTTCAGCCCCAATGTCCTGGGCCACAGATAATTCCTCCACTTATAGCCCCACCTACTTATGTTATCCGGGATTTAGTTTTTGCTCCATCACCATCACCTCAGTATGATGGAACTGGTGCAGAAGCACCCGAAGCTTCGACAGTGCCGGGGACAGGGTTTCTTCCAGGATATCCACCGGCGAATGGCCCTATTAGTGGGATTGCTGCTGCTTCTGCTGCAACCTCCTTAGTGAACCCATTGCCAACTTTGACATCTGAGTTTTTGTTATTACTTGCAAAGTTGATAATCCTTGTGGCATTTTAA 1293 0.4238 MPNQKKSINYHYTTLILLLLNTALVLNNVLLPVNCKSTIEPCSSNDKCNALLGYKLYTDLKVSEVASIFQIDPISLLTANSIDTSYPNVEEQILPSQLFLKVPITCSCIDGIRKSVSTHYRIRPSDTISFIADSIYGGLVSVDQLREANSIDDSSSSVIDVGQRLVVPLPCTCFNGSDNSLPAIYLSHVVQEVENLATIAARYFTTVTDLMNVNSMGTIDISDGDILAVPIPACASKFPKQASDFGLLVPNGSYAISASHCVQCSCGPQNLDLYCMPASLAVSCSSLQCKSSNLMLGDVTVQPTSGGCNVTSCNYHGFVNSTIVTRLSSSLQPQCPGPQIIPPLIAPPTYVIRDLVFAPSPSPQYDGTGAEAPEASTVPGTGFLPGYPPANGPISGIAAASAATSLVNPLPTLTSEFLLLLAKLIILVAF* 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g1800 430 ProSiteProfiles LysM domain profile. 186 229 IPR018392 -
Aev07g1800 430 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 3 33 369 - -
Aev07g1800 430 ProSiteProfiles LysM domain profile. 118 167 IPR018392 -
Aev07g1800 430 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 33 369 - -
Aev07g1800 430 SMART LysM_2 119 168 IPR018392 -
Aev07g1800 430 SMART LysM_2 187 230 IPR018392 -
Aev07g1800 430 SUPERFAMILY LysM domain 186 231 IPR036779 -
Aev07g1800 430 CDD LysM 187 229 IPR018392 -
Aev07g1800 430 CDD LysM 118 167 IPR018392 -
Aev07g1800 430 Gene3D LysM domain 175 238 IPR036779 -
Aev07g1800 430 Gene3D LysM domain 116 169 IPR036779 -
Aev07g1800 430 Pfam LysM domain 120 168 IPR018392 -
Aev07g1800 430 Pfam LysM domain 188 227 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g1800 Aev-Chr7 19025513 19030615 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g1800 16 404 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 64.962 0.0 526
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev07g1800 - - gmx:100808966 544.273