Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0905 ATGGGAACCGAATCCTCAACGAATTACACATACTTTGGGCGCAGCATCAGCGACCTAAGCATCACCGACGAATCCTCCTCCTCCGCCTTCAGCGACTGCAACAGCGACAGATCCGGCGAATTCTCCTCCGCATCGTCACAGACGCGCCGCCTATTACTAGCCTGCGCCGCCGAAAACTCCGACGACATCATCCGCAGCCTCGTCGCCGATCTCAGCTCCGACTCCGTCGACGAGCAGAAACAAGCCGCCATGGAGATCCGATTGCTCGCGAAGAACAAACCGGAGAATCGAATCAAAATCGCGAAAGCCGGAGCGATCACGCCTCTGATTTCGCTTGTTTCGTCGCAGGACCTTCAGTTGCAGGAATACGGCGTCACCGCGATATTGAACCTCTCGCTCTGCGATGAGAACAAGGACGTGATCGCTTCTTCTGGTGCGATTAGGCCTCTGGTTCGGGCGCTGTGCTCGGGAACCTCGACGGCGAAGGAGAACGCCGCGTGCGCTCTGCTCCGGCTGTCGCAGGTGGAGGAGCTCAAGGCGGCGATAGGCAGGGCCGGCGCGATTCCGCCGCTCGTGAAGCTTCTAGAAACCGGCGGGTTCCGTGGCAAGAAGGACGCGTCAACTACACTGTACTCTCTGTGCTCTACCGTGAAAGAGAACAAGGTGAGGGCGGTGAAGGCAGGGATAATGAAGGTTCTGGTGGAGCTGATGGCGGATTTCGAGTCGAACATGGTGGACAAGTCGGCGTACGTGGCGAGCGTGCTGGTGACGGTGGCGGAGGCGAGGGCGGCGCTGGTGGAGGAGGGAGGAGTTCCGGTGCTGGTGGAGATCGTGGAGGTTGGGACACAGAGACAGAAAGAGGTGGCGGTGGTTATTCTCTTGCAGGTTTGTGAGGACAGTGGCGTGTATCGCACCATGGTGGCTCGTGAAGGCGCAATCCCTCCTTTGGTTGCTTTGTCACAATCCGGCACCAATCGCGCCAAACAAAAGGCGGAGAAACTAATTGAGCTTCTACGGCAACCAAGATCCGGCAATGGCAGTGGGCGTGCGTCAGAAGTGTCAGTGTAA 1068 0.5824 MGTESSTNYTYFGRSISDLSITDESSSSAFSDCNSDRSGEFSSASSQTRRLLLACAAENSDDIIRSLVADLSSDSVDEQKQAAMEIRLLAKNKPENRIKIAKAGAITPLISLVSSQDLQLQEYGVTAILNLSLCDENKDVIASSGAIRPLVRALCSGTSTAKENAACALLRLSQVEELKAAIGRAGAIPPLVKLLETGGFRGKKDASTTLYSLCSTVKENKVRAVKAGIMKVLVELMADFESNMVDKSAYVASVLVTVAEARAALVEEGGVPVLVEIVEVGTQRQKEVAVVILLQVCEDSGVYRTMVAREGAIPPLVALSQSGTNRAKQKAEKLIELLRQPRSGNGSGRASEVSV* 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0905 355 Pfam Armadillo/beta-catenin-like repeat 135 173 IPR000225 GO:0005515
Aev07g0905 355 Pfam Armadillo/beta-catenin-like repeat 94 132 IPR000225 GO:0005515
Aev07g0905 355 Pfam Armadillo/beta-catenin-like repeat 177 215 IPR000225 GO:0005515
Aev07g0905 355 Gene3D - 256 338 IPR011989 -
Aev07g0905 355 PANTHER U BOX DOMAIN-CONTAINING 1 348 - -
Aev07g0905 355 SUPERFAMILY ARM repeat 59 335 IPR016024 -
Aev07g0905 355 Gene3D - 55 255 IPR011989 -
Aev07g0905 355 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 104 146 IPR000225 GO:0005515
Aev07g0905 355 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 4-LIKE ISOFORM X1 1 348 - -
Aev07g0905 355 SMART arm_5 175 215 IPR000225 GO:0005515
Aev07g0905 355 SMART arm_5 257 298 IPR000225 GO:0005515
Aev07g0905 355 SMART arm_5 93 133 IPR000225 GO:0005515
Aev07g0905 355 SMART arm_5 134 174 IPR000225 GO:0005515
Aev07g0905 355 SMART arm_5 299 340 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0905 Aev-Chr7 6385484 6388834 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0905 14 350 U-box Gene Family AT2G23140 46.921 6.56e-86 270
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0905 07 6385484 6388834 Aev08g0401 08 2218824 2220699 PCT