Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0901 ATGGCTTTGGAAGCTCTCAATTCTCCAACCGCCGCCACCAGAGGCACCTATCCGGTGTTCGACGACGTGGCGATCCTAGAGACTTGGACGAAAAGGAAGCGTTCAAAACGTTGTTCCAATGCACGCTTCGATCTCCATAACCATCCTTCATGCACCGAGGAAGAGTATCTCGCTCTCTGCCTCATCATGCTCGCTCGCGGCACAACCACCGTTCCTCCGCCGCCGGCGGAACAAATAATTGATTCCACAACCGCCTCCAAACTCAGTTACAAATGCTCCGTTTGCGACAAGGCCTTCTCTTCTTACCAAGCTCTCGGCGGTCACAAGGCAAGTCACCGGAAAAATTCCGCCGGTGAAGATCACTCAACCTCTTCCGCCGCCGCCACCAGTAGCACCTCCGCCGTGAGTTCCGGCGGCGGGAAGGTTCATGAGTGTTCGATCTGTCATAAGTCTTTTCCAACCGGACAGGCCTTGGGAGGACACAAGCGCTGCCACTACGACGGTGGCGCCGGCACTAGCAGCGGCGGAGTGACGGCGGAGGAAGGTGTGGGATCGACGCACACCGTTGCCAGCTGGCACCGCGAGTTCGACCTCAACATCCCGGCTTTTCCGGATCTATCGAGGGATGAAGAGGTTGAGAGCCCTCACCCTGTGTTGAAGAAGAAGCCTCGCGTTTTCATCAAAAATTGA 690 0.5638 MALEALNSPTAATRGTYPVFDDVAILETWTKRKRSKRCSNARFDLHNHPSCTEEEYLALCLIMLARGTTTVPPPPAEQIIDSTTASKLSYKCSVCDKAFSSYQALGGHKASHRKNSAGEDHSTSSAAATSSTSAVSSGGGKVHECSICHKSFPTGQALGGHKRCHYDGGAGTSSGGVTAEEGVGSTHTVASWHREFDLNIPAFPDLSRDEEVESPHPVLKKKPRVFIKN* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0901 229 ProSitePatterns Zinc finger C2H2 type domain signature. 92 112 IPR013087 -
Aev07g0901 229 Pfam C2H2-type zinc finger 90 114 - -
Aev07g0901 229 Pfam C2H2-type zinc finger 142 167 - -
Aev07g0901 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 143 165 IPR013087 -
Aev07g0901 229 PANTHER ZINC FINGER PROTEIN ZAT10 1 225 - -
Aev07g0901 229 MobiDBLite consensus disorder prediction 120 139 - -
Aev07g0901 229 ProSiteProfiles Zinc finger C2H2 type domain profile. 90 117 IPR013087 -
Aev07g0901 229 PANTHER C2H2 TYPE ZINC FINGER TRANSCRIPTION FACTOR FAMILY-RELATED 1 225 IPR044653 GO:0003700
Aev07g0901 229 SMART c2h2final6 90 112 IPR013087 -
Aev07g0901 229 SMART c2h2final6 143 165 IPR013087 -
Aev07g0901 229 SUPERFAMILY beta-beta-alpha zinc fingers 90 165 IPR036236 -
Aev07g0901 229 ProSitePatterns Zinc finger C2H2 type domain signature. 145 165 IPR013087 -
Aev07g0901 229 Gene3D Classic Zinc Finger 88 165 - -
Aev07g0901 229 MobiDBLite consensus disorder prediction 208 229 - -
Aev07g0901 229 MobiDBLite consensus disorder prediction 110 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0901 Aev-Chr7 6327983 6328672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0901 1 225 C2H2 Transcription Factor Family AT1G27730 55.696 2.03e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Aev07g0901 zf-C2H2_6 2.5e-13 CL0361
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0901 07 6327983 6328672 Aev08g0397 08 2196182 2196961 PCT