Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0886 ATGGACGTGGATCGGATTAAGGGCCCGTGGAGCCCGGAGGAGGATGAGTTACTGAGAAGCCTGGTTGAGGCCCACGGGCCGAGAAACTGGACTACAGTAAGCAAGTCAATTTCGGGCCGGTCCGGCAAGTCGTGCCGGTTACGGTGGTGCAATCAGCTGTCTCCGGAAGTGGAGCACCGCCCCTTCACGGCGGAGGAGGATGATAAAATAATCATAGCTCACACCGTGCACGGAAACAAGTGGGCCACGATAGCCCGGTTACTTAACGGCAGAACAGATAACGCCGTCAAGAACCACTGGAACTCGACGCTCAAGAGAAAATGTTCGGAAACTGACGCCGTTACTGTCGCTGTTTATCCTGAAGCCCGGCCCATGAAAAGATCAGCTACTGGGCCTGAAAGCCCATCGGGATCCGAATTGAGTGATCCGCCAACAACATTTTTGAGCTTGTCTCTGCCGGGCTCGGATTCGCCTAATAATGAATGTGGGCCTTGGGCTAGTTCAGGCCCGGCCCAAAGGTTCAACACAGAGTTCTTGGCGGTTATGCAAGATATGGTAAAGAAGGAAGTGAGGAGTTACATATCAATGATGGTTGAGCAAAACGGGACGGAAGCCATTGGAGACAGTGTTATTAGGAACAGTTGA 645 0.5271 MDVDRIKGPWSPEEDELLRSLVEAHGPRNWTTVSKSISGRSGKSCRLRWCNQLSPEVEHRPFTAEEDDKIIIAHTVHGNKWATIARLLNGRTDNAVKNHWNSTLKRKCSETDAVTVAVYPEARPMKRSATGPESPSGSELSDPPTTFLSLSLPGSDSPNNECGPWASSGPAQRFNTEFLAVMQDMVKKEVRSYISMMVEQNGTEAIGDSVIRNS* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0886 214 CDD SANT 61 104 IPR001005 -
Aev07g0886 214 Gene3D - 60 126 - -
Aev07g0886 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 2 57 IPR017930 -
Aev07g0886 214 Pfam Myb-like DNA-binding domain 10 69 - -
Aev07g0886 214 ProSiteProfiles Myb-like domain profile. 2 53 IPR001005 -
Aev07g0886 214 Gene3D - 6 58 - -
Aev07g0886 214 SMART sant 6 55 IPR001005 -
Aev07g0886 214 SMART sant 58 106 IPR001005 -
Aev07g0886 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 59 108 IPR017930 -
Aev07g0886 214 SUPERFAMILY Homeodomain-like 4 100 IPR009057 -
Aev07g0886 214 CDD SANT 9 51 IPR001005 -
Aev07g0886 214 ProSiteProfiles Myb-like domain profile. 54 104 IPR001005 -
Aev07g0886 214 PANTHER MYB PROTEIN-RELATED 3 142 - -
Aev07g0886 214 MobiDBLite consensus disorder prediction 119 168 - -
Aev07g0886 214 MobiDBLite consensus disorder prediction 131 168 - -
Aev07g0886 214 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 3 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0886 Aev-Chr7 6166237 6166881 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0886 2 201 MYB Transcription Factor Family AT4G37260 45.985 2.46e-69 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev07g0886 Myb_DNA-bind_6 5.7e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0886 07 6166237 6166881 Aev05g0681 05 4738490 4739479 ECH
Aev07g0886 07 6166237 6166881 Aev01g0533 01 4779138 4780049 ECH
Aev07g0886 07 6166237 6166881 Aev07g0886 07 6166237 6166881 ECH