Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0878 ATGGGTTCGATCAGATCCTCTCTCACCATAACCATGTTCATGCTCATGCTCCTGGCGGTTTCATCCGCCATGGACATGTCCATAATCTCGTACGACAAAACCCAATCGTCTTCTTCTTCTTCTTCTTCTAGGACCGACGAAGAAGTCATGTCGTTGTACGAGGAGTGGTTAATCAAACACAAGAAGCTCCAAAACTCGATCGGAGAGAAGCAGAAGCGGTTCGAGATCTTCAAGGACAACCTCCGGTTCATCGATGAGCACAACAGTGCTGCGAACCGGAGTTATAAGCTCGGTCTGAACCGGTTCGCTGATATGACCAACGAGGAGTACAGAGCAAAGTTCTTGGGTACGAGGATCGATCCTAACCGTAGGATTAAGAGGTTGAGTAGCAGGAGTAACAGATACGCGCCACGTGTCGGTGACTCGTTGCCGGAGAGCGTTGATTGGAGGAAGGAAGGTGCTGTTGTTGGAGTCAAAGACCAAGGAAGTTGTGGGAGTTGTTGGGCATTCTCAACAATTGGTGCGGTAGAAGGAATAAACAAGATTGTCACAGGGGATTTGATTTCACTATCAGAACAAGAGCTTGTGGATTGTGACACATCCTATAACGAAGGATGCAATGGTGGACTCATGGATTATGCTTTTGAGTTCATCATCAACAATGGTGGAATTGATTCGGAAGAGGATTACCCTTACAGCGGTGTTGATGGTACATGTGACACTTACAGGAAAAATGCTAAGGTTGTTACTATTGATGACTATGAAGATGTTCCTGCCTATGATGAGTTAGCTTTGAAAAAAGCTGTTGCCAATCAGCCAGTGGCTGTTGCTGTTGAAGGAGGTGGCAGGGAATTCCAGTTATATGTATCTGGTGTATTTACTGGTAGATGTGGAACAGCATTGGACCATGGTGTTGTTGCTGTTGGATATGGAAAAGACAATGGCCGTGATTATTGGATTGTGAGGAACTCATGGGGTCCTGACTGGGGGGAAGAAGGTTACATCCGGTTGGAGCGCAACCTCGGTAACAGCAGATCAGGCAAGTGTGGAATCGCGATCGAGCCATCTTACCCTATTAAGAAGGGACCAAACCCGCCGAACCCAGGGCCATCGCCGCCAACACCGGTGAAGCCACCATCTGTTTGTGATAATTACTACAGCTGCGCCTCGAGCACGACTTGCTGCTGCATTTACGAGTACGGTAAGACTTGCTTCGAGTGGGGATGCTGCCCTCTTGAGGGTGCTACTTGCTGTGAAGATCACTACAGTTGCTGCCCACATGACTATCCCATCTGCAATGTTTATCAAGGGACATGTCTTAAGAGCATGAACAATCCATTCGGAGTGAAGGCATTGAAACGAATTCCAGCCAAACCCCACTCTGCATTTGTTGGTGACAACAAAATCAGCAGTGCTTAA 1419 0.475 MGSIRSSLTITMFMLMLLAVSSAMDMSIISYDKTQSSSSSSSSRTDEEVMSLYEEWLIKHKKLQNSIGEKQKRFEIFKDNLRFIDEHNSAANRSYKLGLNRFADMTNEEYRAKFLGTRIDPNRRIKRLSSRSNRYAPRVGDSLPESVDWRKEGAVVGVKDQGSCGSCWAFSTIGAVEGINKIVTGDLISLSEQELVDCDTSYNEGCNGGLMDYAFEFIINNGGIDSEEDYPYSGVDGTCDTYRKNAKVVTIDDYEDVPAYDELALKKAVANQPVAVAVEGGGREFQLYVSGVFTGRCGTALDHGVVAVGYGKDNGRDYWIVRNSWGPDWGEEGYIRLERNLGNSRSGKCGIAIEPSYPIKKGPNPPNPGPSPPTPVKPPSVCDNYYSCASSTTCCCIYEYGKTCFEWGCCPLEGATCCEDHYSCCPHDYPICNVYQGTCLKSMNNPFGVKALKRIPAKPHSAFVGDNKISSA* 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0878 472 Pfam Cathepsin propeptide inhibitor domain (I29) 53 110 IPR013201 -
Aev07g0878 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases asparagine active site. 318 337 IPR025661 -
Aev07g0878 472 PANTHER CYSTEINE PROTEASE 33 388 - -
Aev07g0878 472 SUPERFAMILY Granulin repeat 379 413 - -
Aev07g0878 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases histidine active site. 301 311 IPR025660 -
Aev07g0878 472 PANTHER CYSTEINE PROTEASE FAMILY C1-RELATED 33 388 - -
Aev07g0878 472 SMART GRAN_2 382 439 IPR000118 -
Aev07g0878 472 SMART pept_c1 143 359 IPR000668 GO:0006508|GO:0008234
Aev07g0878 472 Pfam Papain family cysteine protease 143 359 IPR000668 GO:0006508|GO:0008234
Aev07g0878 472 SUPERFAMILY Cysteine proteinases 45 359 IPR038765 -
Aev07g0878 472 Gene3D Granulin 379 442 IPR037277 -
Aev07g0878 472 ProSitePatterns Eukaryotic thiol (cysteine) proteases cysteine active site. 161 172 IPR000169 -
Aev07g0878 472 SMART Inhibitor_I29_2 53 110 IPR013201 -
Aev07g0878 472 PRINTS Papain cysteine protease (C1) family signature 161 176 IPR000668 GO:0006508|GO:0008234
Aev07g0878 472 PRINTS Papain cysteine protease (C1) family signature 303 313 IPR000668 GO:0006508|GO:0008234
Aev07g0878 472 PRINTS Papain cysteine protease (C1) family signature 318 324 IPR000668 GO:0006508|GO:0008234
Aev07g0878 472 CDD Peptidase_C1A 144 358 IPR039417 -
Aev07g0878 472 Gene3D Cysteine proteinases 20 361 - -
Aev07g0878 472 Pfam Granulin 393 440 IPR000118 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0878 Aev-Chr7 6069558 6074575 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0878 07 6069558 6074575 Aev01g0538 01 4854161 4857956 ECH
Aev07g0878 07 6069558 6074575 Aev09g2524 09 26821578 26823921 ECH
Aev07g0878 07 6069558 6074575 Aev07g0878 07 6069558 6074575 ECH
Aev07g0878 07 6069558 6074575 Aev08g0370 08 2018972 2022039 PCT