Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0866 ATGGAAGATAGAGATAGTTGTTCCACAAATTCAACTACTACTATCACACCGGTAGTGGAAAAGAAGTTGAAACTTCACAAAGAGAAATCAAACAAACCCTACAAAGGGATTAGGATGAGAAAGTGGGGCAAGTGGGTGGCTGAGATCAGAGAACCTAAGAAGAGGTCAAGGATATGGCTAGGCTCTTATACCTCGCCGGTGGCCGCCGCACGTGCCTATGATACCGCCGTGTTCTACCTACGAGGCCCTTCGGCTCGCCTTAATTTTCCAGAATTGTTATTCCACGACCCAAATATCAAAAATAGTGGTTATTCTTCTTCTTTTTCATCTTCTTCTTCCATGTCGATGGAACAAGAAGGTGAATACACGTTGTCTTCGGAGTCCATAAGAAAAAGGGCAACACAAGTTGGTGCTAGAGTTGATGCTCTCCAAAAAACAGCATCTTCAAACAATAATTGTAAATCAAGTGCTACCTCTCATCATGAGAAACCTGATTTGAATGAGTTTCCTAAACCCGAAGAAGATTCTCTTGACTTTTAG 540 0.4222 MEDRDSCSTNSTTTITPVVEKKLKLHKEKSNKPYKGIRMRKWGKWVAEIREPKKRSRIWLGSYTSPVAAARAYDTAVFYLRGPSARLNFPELLFHDPNIKNSGYSSSFSSSSSMSMEQEGEYTLSSESIRKRATQVGARVDALQKTASSNNNCKSSATSHHEKPDLNEFPKPEEDSLDF* 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0866 179 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 7 174 - -
Aev07g0866 179 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Aev07g0866 179 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 MobiDBLite consensus disorder prediction 158 179 - -
Aev07g0866 179 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 MobiDBLite consensus disorder prediction 135 179 - -
Aev07g0866 179 Pfam AP2 domain 34 82 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Aev07g0866 179 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 PRINTS Ethylene responsive element binding protein signature 72 92 IPR001471 GO:0003700|GO:0006355
Aev07g0866 179 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR RAP2-1-RELATED 7 174 - -
Aev07g0866 179 MobiDBLite consensus disorder prediction 141 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0866 Aev-Chr7 5946727 5947266 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0866 27 178 AP2-EREBP Transcription Factor Family AT2G23340 51.829 1.74e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Aev07g0866 AP2 2e-10 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0866 07 5946727 5947266 Aev07g0866 07 5946727 5947266 ECH