Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0864 ATGGCGCAGATTCAGGTGCAGCACCAGAGCGCGGTGTCGGGTCCGCCTCAAAACGGTGTCGTTTCTGCGGCGGCGCCGGCGAACGGTGCTCCGAACGCGAACCAGTTTGTTACGACGTCGTTGTACGTTGGGGATCTGGATGTTGACGTGGACGAGAGGCATCTCTATGATTTGTTCAACCAGGTTGGGCAAGTGGTGTCGGTTAGGGTTTGCAGCGACTTGACCACTCGCCGATCGCTCGGTTACGGTTACGTTAATTTCAGTAACCCTCAGGATGCTGCTAGAGCATTAGATGTGCTGAATTTCACTCCACTGAACAGCAAGCCCATTAGGATCATGTATTCTCACCGGGATCCTAGTATTCGCAAGAGTGGTACTGCCAATATTTTTATTAAGAATTTGGATAAGGCTATTGATCACAAAGCTTTACATGAAACTTTTTCTTCTTTTGGACAAATTCTGTCTTGTAAGATTGCCACTGATGCTTCTGGCCAATCGAAAGGCTATGGTTTTGTTCAGTTTGACACTGAAGAGTCTGCACAGAATGCTATTGACAAATTAAATGGCATGCTGATCAATGATAAGCAGGTCTACGTAGGTCATTTCCTACGAAAGCAAGATAGAGAGAATGCTTTTAGTAAGACAAAATTCAATAATGTTTATGTGAAAAACCTGTCTGAGTCAGTCACAGATGATGACTTGAAGAAGATTTTTGGAGAATATGGAACGATTACTAGTTCTGTATTAATGAGAGATGCTGATGGTAAATCAAAGTGTTTTGGTTTTGTTAACTTTGAAAACCCAGATGATGCTGCCAATGCTGTTGAGGCACTTAATGGAAAGAAATTTGATGACAAGGAGTGGTATGTTGGAAAAGCCCAGAAAAAATCTGAACGAGAGCTTGAACTGAAAAGACGGTTTGAGCAGAGTATCAAGGAAGCTGTTGACAAATACCAGGGTGTGAACTTGTATCTTAAGAACTTGGATGATACCATCAATGATGAAAAGCTTAGAGAACTCTTCTCCGAGTATGGTACAATAACCTCATGCAAGGTTATGCGAGACCCAAACGGAATCAGTAGAGGATCAGGATTTGTTGCATTTTCAACTCCTGAGGAAGCATCTCGAGCTCTTGCGGAGATGAATGGTAAAATGATTTCTGGCAAACCTCTGTATGTTGCTCTTGCCCAGAGAAAAGAAGAGAGAAGAGCTCGGCTACAGGCGCAGTTCTCCCAAATGAGGCCTGTTGCAATGACGCCTTCTGTTGCACCTCGGTTACCACTCTATCCACCTGGTGCTCCTGGTATAGGGCAACAATTTTTGTATGGACAAGGACCCCCTACCATGATTCCTCCACAGGCTGGATTTGGCTACCAACAGCAACTTGTTCCTGGGATGAGACCTGGTGGTCCAATGCAAAGCTTCTTTGTTCCAATGGTTCAGCAGGGTCAACAAGGCCAGCGTCCTGGTGGACGCCGTGGAGCAGGCCCTGTTCAACAACCCCAGCAGCCAGTGCCAATGATGCAGCAGCAGATGCTTCCAAGGGGACGTGTCTATCGTTATCCTCCTGGTCGCAACATGCAAGATGTTCCACTGCCAGGAGTAGCCGGAGGAATGCTCCCAGTGCCATATGACATGGGTGGGCTGCCAATCCGGGATGGCGTTGGACAGCCAATAGGTATTCAGGCCTTGGCTACAGCCCTCGCAAATGCTGCTCCAGAACAACAAAGGACTATGCTTGGTGAGGCGTTATACCCACTTGTAGATCAGCTGGAACATGATGCTGCGGCTAAGGTTACCGGCATGCTTTTGGAGATGGATCAGCCAGAGGTACTGCATCTGATTGAATCACCAGATGCTCTCAAGGCGAAAGTTGCTGAAGCCATGGATGTGCTGAGAAATGTTGCTCAACAGCAGGCTGCCAACAATCCGGCCGATCAACTAGCCTCCCTCTCTCTTAACGATAATCTGGTGTCTTAG 1980 0.4702 MAQIQVQHQSAVSGPPQNGVVSAAAPANGAPNANQFVTTSLYVGDLDVDVDERHLYDLFNQVGQVVSVRVCSDLTTRRSLGYGYVNFSNPQDAARALDVLNFTPLNSKPIRIMYSHRDPSIRKSGTANIFIKNLDKAIDHKALHETFSSFGQILSCKIATDASGQSKGYGFVQFDTEESAQNAIDKLNGMLINDKQVYVGHFLRKQDRENAFSKTKFNNVYVKNLSESVTDDDLKKIFGEYGTITSSVLMRDADGKSKCFGFVNFENPDDAANAVEALNGKKFDDKEWYVGKAQKKSERELELKRRFEQSIKEAVDKYQGVNLYLKNLDDTINDEKLRELFSEYGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALAEMNGKMISGKPLYVALAQRKEERRARLQAQFSQMRPVAMTPSVAPRLPLYPPGAPGIGQQFLYGQGPPTMIPPQAGFGYQQQLVPGMRPGGPMQSFFVPMVQQGQQGQRPGGRRGAGPVQQPQQPVPMMQQQMLPRGRVYRYPPGRNMQDVPLPGVAGGMLPVPYDMGGLPIRDGVGQPIGIQALATALANAAPEQQRTMLGEALYPLVDQLEHDAAAKVTGMLLEMDQPEVLHLIESPDALKAKVAEAMDVLRNVAQQQAANNPADQLASLSLNDNLVS* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0864 659 Gene3D - 557 639 - -
Aev07g0864 659 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 127 204 IPR000504 GO:0003723
Aev07g0864 659 ProSiteProfiles Poly(A)-binding protein C-terminal (PABC) domain profile. 560 637 IPR002004 GO:0003723
Aev07g0864 659 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 220 288 IPR000504 GO:0003723
Aev07g0864 659 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 323 391 IPR000504 GO:0003723
Aev07g0864 659 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 129 197 IPR000504 GO:0003723
Aev07g0864 659 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 41 111 IPR000504 GO:0003723
Aev07g0864 659 CDD RRM4_I_PABPs 320 398 - -
Aev07g0864 659 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 39 117 IPR000504 GO:0003723
Aev07g0864 659 PANTHER POLYADENYLATE-BINDING PROTEIN 28 642 - -
Aev07g0864 659 CDD RRM2_I_PABPs 125 201 IPR045305 -
Aev07g0864 659 PANTHER RNA BINDING PROTEIN 28 642 - -
Aev07g0864 659 SUPERFAMILY RNA-binding domain, RBD 215 306 IPR035979 GO:0003676
Aev07g0864 659 SMART rrm2_1 40 113 IPR003954 GO:0003676
Aev07g0864 659 SMART rrm2_1 219 291 IPR003954 GO:0003676
Aev07g0864 659 SMART rrm2_1 128 200 IPR003954 GO:0003676
Aev07g0864 659 SMART rrm2_1 322 394 IPR003954 GO:0003676
Aev07g0864 659 SUPERFAMILY RNA-binding domain, RBD 316 415 IPR035979 GO:0003676
Aev07g0864 659 SUPERFAMILY RNA-binding domain, RBD 39 208 IPR035979 GO:0003676
Aev07g0864 659 MobiDBLite consensus disorder prediction 1 17 - -
Aev07g0864 659 SUPERFAMILY PABC (PABP) domain 502 653 IPR036053 GO:0003723
Aev07g0864 659 TIGRFAM PABP-1234: polyadenylate binding protein, human types 1, 2, 3, 4 family 40 633 IPR006515 GO:0003723
Aev07g0864 659 MobiDBLite consensus disorder prediction 1 25 - -
Aev07g0864 659 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 321 398 IPR000504 GO:0003723
Aev07g0864 659 SMART rrm1_1 40 113 IPR000504 GO:0003723
Aev07g0864 659 SMART rrm1_1 128 200 IPR000504 GO:0003723
Aev07g0864 659 SMART rrm1_1 219 291 IPR000504 GO:0003723
Aev07g0864 659 SMART rrm1_1 322 394 IPR000504 GO:0003723
Aev07g0864 659 Gene3D - 127 201 IPR012677 -
Aev07g0864 659 MobiDBLite consensus disorder prediction 482 504 - -
Aev07g0864 659 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 218 295 IPR000504 GO:0003723
Aev07g0864 659 CDD RRM1_I_PABPs 40 119 - -
Aev07g0864 659 Pfam Poly-adenylate binding protein, unique domain 568 632 IPR002004 GO:0003723
Aev07g0864 659 Gene3D - 204 305 IPR012677 -
Aev07g0864 659 Gene3D - 306 410 IPR012677 -
Aev07g0864 659 Gene3D - 1 126 IPR012677 -
Aev07g0864 659 SMART poly_2 572 635 IPR002004 GO:0003723
Aev07g0864 659 CDD RRM3_I_PABPs 217 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0864 Aev-Chr7 5921595 5925540 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0864 1 654 Eukaryotic Initiation Factors Gene Family AT4G34110 67.073 0.0 859
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0864 07 5921595 5925540 Aev03g0258 03 1979836 1984440 ECH
Aev07g0864 07 5921595 5925540 Aev07g0864 07 5921595 5925540 ECH