Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0861 ATGCAAGGACAGAGAGGTACAATCGGTTCCTTGACTGAAACCTTAGAATTTGAATCACCACCGAGCAGCGCCGCAGTTAATCCACAGATTTGCTGGAATAATATGCGGAACCCTGCGGAGAATAGGTTACCTGAATATATACTTCCCCCGGGTGATGTAAACCCTTCTTATGTGAATCCTATTAACCATGGATGGCAGAACTTGAGTGGATGGAGCTTAGGTGAGCCAAGTTATAGTAGTAATGCACAGAATGAGGCTAACAACAATGAGCCGAAAAGGGAGCTTGGATGGTCATCTTCTATAAGTTTTGGTGCCACACCTGGTTCAAGACAAGAAGAACGGCGTATTGAACCAACCATCGCTGTTCCAATGTGCAGTATCAATACAAATCCCATGTATATGAACAACTCCAATTCTCATTTGGGGTCCCAGAATCTTAATCTAAATGCAGCTCTAGCAGATAGCAGCACTCCCAACAATCATCGTGTGGAACATGCTAACTTGCAGTTGCAAAAGTCTAGTGGCACCGTTAGCGAGCATATTCCTCCTACTGTTGGTTCTGGTCCTTTGACGCTTCCATCCAGAAGTAATGGCTTTTTGTTTGAGGATAGTGATGGTAGACCAGGGTCTTCTGCAGACACTCGGCGCGTGTCTTGTAAAAGAAAGGCCGTCGAACGAAGTGTTGGACAGTCTTCGGAAGGTGGAAGTTCTAGCTACAGTCAGCATACAGATGGTGTCGCTTGGAATGCTCAGGATCATGTGGGCAGCAGCGTTACCAGACCAGCTTCAGCAGAACAGGCAAGTGCAAGACTTGGTCTTAGTATGGGGGACGGATCCTCTGAGAGTGCTCCCGATTCGAATGTTGCTGGAAGCGCAGAAACCTTCCACAGGAACTTCCGTTTAAGGGTAAATCCTTCAAGCCATCAAACTTCCGTTCCTCCACCAGCATTCTTGACTGGAAGTTTGGTTAGGAATTCTGGTGTTACCTCATCCTCTCCAATGTTGCCAAGATTTCATCCTGTTGATAATTCTCAGGATGTGAGATCGGTACCACCTGTGGATACCATGCTTCCTCATCACCAGTCCGTTCTAATTCATGTTCCTGAATTACAAAGGAATTTGCAATCAATAAGGTGGAGTGGTGCTTCTAGCTCAACAAACAACCATTCATTGAATTCAGCGGAAACTGTACCACACGAGGAAGCAAGTGCAAGAACTTTGCCTAGAAACATTTTAGAACACCCTGTGTTCGCACCTGGAACCAATTTAAGAAACTTGGTTCGACATCCAACAAATAGAGCATCAGGTAGTGCAAACTTAGGTAGTGTAAACTTAAGTATTCCTGGAAACGTTGCTTCTTCATCACGGACTGGGTCACATTCAGCTATCAATCCATCATCTGCCTCACCGTGGGTTTCTCGTCCCAATGCTCAGCACTATCCACGCAGGTTATCTGAATATGTTCGTCGGTCCTTGTTTCCTCCTGGTTCAGAGGCTCCTGGAAGCTCGAGCAATAATTATCCCTCCACACGTGGTCCCGACTCAAGGGCACCGCCATCAGGAGCACACCCGGGATTACCTTCATGGTTGGAGAGGCCAGGTGATCATGAATATGGAATTCCTTATTCATTGCGGTCTTTGGCTGTTGCTGGTGAAGGAAGTAGTAGACTGGTGTCTGAGCTCCGAAATGTGTTGGGCATCATGCGTCGGGGTGGGAGCCTGCGATTTGAGGATGTTATGATCCTCGACCAATCAGTGTTTTCTGGAATTGCTGATATTCATGACCGACACAGGGATATGCGACTTGATGTTGACAACATGTCATATGAGGAATTACTGGCTTTGGAAGAGCGCATTGGAAATGTGAGCACTGGATTGAGTGAGGAAACCATATTGAAGCAAATGAAACAGAAGAAGTACTCAGTTGAAGCCGGATCGCAGAACGAGGCAGAACCCTGCTGCGTTTGTCAGGAGGAGTACAAGGATGGAGATGGTATGGGTTCGCTGGATTGCGGCCACGACTTCCATAGCGACTGTATCAAACAGTGGCTAATGCGTAAGAATCTGTGTCCCATTTGCAAGACAACAGGCTTGGCAGCGAAATGA 2106 0.4677 MQGQRGTIGSLTETLEFESPPSSAAVNPQICWNNMRNPAENRLPEYILPPGDVNPSYVNPINHGWQNLSGWSLGEPSYSSNAQNEANNNEPKRELGWSSSISFGATPGSRQEERRIEPTIAVPMCSINTNPMYMNNSNSHLGSQNLNLNAALADSSTPNNHRVEHANLQLQKSSGTVSEHIPPTVGSGPLTLPSRSNGFLFEDSDGRPGSSADTRRVSCKRKAVERSVGQSSEGGSSSYSQHTDGVAWNAQDHVGSSVTRPASAEQASARLGLSMGDGSSESAPDSNVAGSAETFHRNFRLRVNPSSHQTSVPPPAFLTGSLVRNSGVTSSSPMLPRFHPVDNSQDVRSVPPVDTMLPHHQSVLIHVPELQRNLQSIRWSGASSSTNNHSLNSAETVPHEEASARTLPRNILEHPVFAPGTNLRNLVRHPTNRASGSANLGSVNLSIPGNVASSSRTGSHSAINPSSASPWVSRPNAQHYPRRLSEYVRRSLFPPGSEAPGSSSNNYPSTRGPDSRAPPSGAHPGLPSWLERPGDHEYGIPYSLRSLAVAGEGSSRLVSELRNVLGIMRRGGSLRFEDVMILDQSVFSGIADIHDRHRDMRLDVDNMSYEELLALEERIGNVSTGLSEETILKQMKQKKYSVEAGSQNEAEPCCVCQEEYKDGDGMGSLDCGHDFHSDCIKQWLMRKNLCPICKTTGLAAK* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0861 701 MobiDBLite consensus disorder prediction 381 399 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 76 107 - -
Aev07g0861 701 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 616 697 IPR013083 -
Aev07g0861 701 SUPERFAMILY RING/U-box 642 696 - -
Aev07g0861 701 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF165 1 699 IPR045191 GO:0061630
Aev07g0861 701 Pfam Ring finger domain 653 694 IPR001841 -
Aev07g0861 701 MobiDBLite consensus disorder prediction 1 23 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 497 513 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 492 532 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 172 243 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 451 474 - -
Aev07g0861 701 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MBR2-LIKE ISOFORM X1 1 699 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 451 476 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 208 227 - -
Aev07g0861 701 SMART ring_2 653 693 IPR001841 -
Aev07g0861 701 MobiDBLite consensus disorder prediction 76 116 - -
Aev07g0861 701 ProSiteProfiles Zinc finger RING-type profile. 653 694 IPR001841 -
Aev07g0861 701 MobiDBLite consensus disorder prediction 381 408 - -
Aev07g0861 701 CDD RING-H2_TTC3 652 694 - -
Aev07g0861 701 MobiDBLite consensus disorder prediction 229 243 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0861 Aev-Chr7 5891127 5895091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0861 1 698 C3H Transcription Factor Family AT2G15530 33.601 1.35e-80 269
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0861 07 5891127 5895091 Aev03g0253 03 1952529 1960100 ECH
Aev07g0861 07 5891127 5895091 Aev07g0861 07 5891127 5895091 ECH
Aev07g0861 07 5891127 5895091 Aev08g0360 08 1944448 1948513 PCT