Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0860 ATGGTTGGTTCCACTAGTGCTGGTGGTGGTAGTTGTCCACCACCACCACCATCAGTGAGACCCTCTTTCCCTTGTGATTCAGAAGAGTTCTCTGCTCTGTTCAACCAACTCCTATCCCCAGAAATGGACCCCAACAACAACAACATAATACCAACAAACAGACTTCTTCTTCACCCTTCTTCTTCTTCTTCTTCCTCTGTTTTTAATTTCTCTTCTCATCATAATAATGACCCTTTTCATCACAACAATACTAATACCAATGATGATGATGATGGTTATATCCTTGCACCTCTTCTTCCTTCAAATTCTAATCCCAATAACACCATTACTTGTTCCATTCAGAAGAATGGTGAGGATTCAGAATTGGCATCAAAGGCTGTCCCACCACCACGTACTTCTTCAAAGAGAAGCAGAGCTGCAGAGTTCCATAATTTGTCTGAAAAGAGAAGGAGAAGTAGGATTAATGAGAAGATGAAAGCTTTGCAGAATTTAATTCCAAATTCTAACAAGACAGACAAAGCTTCAATGCTAGATGAAGCCATAGAATATTTAAAGCAACTTCAGCTTCAAGTTCAGATGCTAATGATGAGAAATGGTTTGAGCTTGCATCCAATGTCTTTACCAGGAGGATTGAGACCTATGGTATTGCCTCACTCTGGTTTGAATTTTGATGAGGGCAATGGATTGATTCAGAATTCCATCGGTGGAATCGTCTCGTCGGCGGCAAACGATGATGAAAGCTCGGCGCGCCCTTCGTTCTGTTTTCCGAAACAATGCAGCATCTCTAATCAGTCTGCTGCCATGCCTTCACTGACAAACATAGCTACATCAGATAATTCATCAAGCTTTCAACCCTCTATTAAGGATGGACACTGCAACAACATGCCACAACTGCTTTTGGATACAAGAAGGATTGGAAAAACCCCTTCTCCAGATGTGTCTTAA 945 0.4148 MVGSTSAGGGSCPPPPPSVRPSFPCDSEEFSALFNQLLSPEMDPNNNNIIPTNRLLLHPSSSSSSSVFNFSSHHNNDPFHHNNTNTNDDDDGYILAPLLPSNSNPNNTITCSIQKNGEDSELASKAVPPPRTSSKRSRAAEFHNLSEKRRRSRINEKMKALQNLIPNSNKTDKASMLDEAIEYLKQLQLQVQMLMMRNGLSLHPMSLPGGLRPMVLPHSGLNFDEGNGLIQNSIGGIVSSAANDDESSARPSFCFPKQCSISNQSAAMPSLTNIATSDNSSSFQPSIKDGHCNNMPQLLLDTRRIGKTPSPDVS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0860 314 MobiDBLite consensus disorder prediction 1 24 - -
Aev07g0860 314 PANTHER TRANSCRIPTION FACTOR SPATULA 55 289 - -
Aev07g0860 314 SMART finulus 144 193 IPR011598 GO:0046983
Aev07g0860 314 MobiDBLite consensus disorder prediction 111 150 - -
Aev07g0860 314 Pfam Helix-loop-helix DNA-binding domain 142 188 IPR011598 GO:0046983
Aev07g0860 314 Gene3D - 133 197 IPR036638 GO:0046983
Aev07g0860 314 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 138 187 IPR011598 GO:0046983
Aev07g0860 314 PANTHER TRANSCRIPTION FACTOR PIF1-RELATED 55 289 IPR031066 -
Aev07g0860 314 MobiDBLite consensus disorder prediction 136 150 - -
Aev07g0860 314 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 135 198 IPR036638 GO:0046983
Aev07g0860 314 CDD bHLH_AtPIF_like 138 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0860 Aev-Chr7 5881522 5884744 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0860 138 216 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G36930 85.000 7.28e-38 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Aev07g0860 HLH 3e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0860 07 5881522 5884744 Aev07g0860 07 5881522 5884744 ECH