Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0858 ATGGCTCTTCTCCTAGACAACAACAGTGAAGGCATATTGCTGTGCCTGGAGACACAGAACAACAAAACAGTGCCAGCACCGTTCCTCACAAAGACATACGAACTGGTGGATGATGCCACCACAGACCACATAGTCTCCTGGGGCGAAGACCACGCCACCTTTGTCGTTTGGAGACCACCCGAGTTCGCTAGAGATCTTCTTCCTAACTATTTCAAGCACAACAACTTCTCTAGCTTCGTTCGCCAACTCAACACTTATGGATTCAGAAAGATTGTACCTGATAGATGGGAATTTGCAAACGAGTTCTTCAAGAAAGGTGAGAAGCACTTGCTTTGTGAGATCCATAGAAGAAAAACATCACAACCTCATCAACAACAACAACACTACCACCACCACCATTATCCTCATTCTCCAATTATAGGACTCAACAACAACAACATTAACCCTTCCACCACTTTCTACCCTTTCCAACAACACAACAACAACCACAACCACAACCGAGTCAGCATCTCTCCCCCTAACTCGGACGAGTTAGCATCATGGTGTGATGACTCGCCCCCAACAACAATATTTAACAACAACAGCAATTCTAACTCTTCTAATTCTTCTTCATTCCTTGCACTTTCCGAAGACAATGAAAGGCTTAGAAGAAGCAACCACATCCTAATGTCGGAATTAGCTCACATGAAGAAGCTCTACAATGACATCATCTACTTTGTTCAGAATCATGTTAAGCCTGTCTCACCGACCAACACTACTTATACCCCGTATTGCAATAACCAACTCCTAGGGGGTCATTCTGCAATTAGTAGTAATACTAATAATAATTACAAGCAAGTACCCAATTATGATGTCAATTATTATTCCTCTTCCCCTACAAACACATCAAGGAGCACCATAACAATGGTTGAGCAACAAAGTAGTAGTAGTAATCATCATATGAAGAATAATAATAATAATAATTGCAAGACGAAGCTTTTTGGAGTGTCTCTTCAATCCAATAAGAAAAGGGTGCACCCTGAATTTGGATCTAACCATTTCAATAAGGCTCGTTTGGTTCTGGAAAATTATCATCATGATGATGGTGCTGATGATTTGGGCTTGAATCTTATGCCTCCTTCCAATTGTTATTAA 1134 0.4109 MALLLDNNSEGILLCLETQNNKTVPAPFLTKTYELVDDATTDHIVSWGEDHATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYGFRKIVPDRWEFANEFFKKGEKHLLCEIHRRKTSQPHQQQQHYHHHHYPHSPIIGLNNNNINPSTTFYPFQQHNNNHNHNRVSISPPNSDELASWCDDSPPTTIFNNNSNSNSSNSSSFLALSEDNERLRRSNHILMSELAHMKKLYNDIIYFVQNHVKPVSPTNTTYTPYCNNQLLGGHSAISSNTNNNYKQVPNYDVNYYSSSPTNTSRSTITMVEQQSSSSNHHMKNNNNNNCKTKLFGVSLQSNKKRVHPEFGSNHFNKARLVLENYHHDDGADDLGLNLMPPSNCY* 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0858 377 SMART hsfneu3 24 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g0858 377 Gene3D - 19 119 IPR036388 -
Aev07g0858 377 ProSitePatterns HSF-type DNA-binding domain signature. 67 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g0858 377 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 374 IPR027725 -
Aev07g0858 377 PANTHER BNAC06G00310D PROTEIN 16 374 - -
Aev07g0858 377 SUPERFAMILY "Winged helix" DNA-binding domain 25 117 IPR036390 -
Aev07g0858 377 Pfam HSF-type DNA-binding 28 117 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g0858 377 PRINTS Heat shock factor (HSF) domain signature 79 91 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g0858 377 PRINTS Heat shock factor (HSF) domain signature 66 78 IPR000232 GO:0003700|GO:0006355|GO:0043565
Aev07g0858 377 PRINTS Heat shock factor (HSF) domain signature 28 51 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0858 Aev-Chr7 5857609 5859501 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0858 1 371 HSF AT1G46264 53.141 6.52e-115 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Aev07g0858 HSF_DNA-bind 2.1e-31 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0858 07 5857609 5859501 Aev07g0858 07 5857609 5859501 ECH
Aev07g0858 07 5857609 5859501 Aev08g0358 08 1923638 1924987 PCT