Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0818 ATGGAACAATCCAACGGCTCTGATTCGTCGCAGCAACCACCGTCGACGGAGCAGAATCAACAGCCGCAACCGCAGCAGCAGCAGCAGAGGCAGCCGCAAGCTCCGCCGCAGCCGGTGGCGGTTCCGCAGCAGTGGATGCCGATGCAGTATCCTGCGGCGGCGATGGTAATGCAGCACCGAATGATGCCGCCGCCGCCTCCACCGCAGCACTATGCGCCGCCGCACTACGTGCCTTATCATCACCATCAGTATCACGTGCCGCCGCACGTGACTCATCACCAGCAGAATCAGTACCAGAATGGATCCAACGGTGGGGAGAATAACAAGACGGTTTGGATCGGCGATTTGCATCACTGGATGGATGAGAACTATCTCCATCGCTGTTTCGCTTCAACTGGCGAGATTTTCTCCATCAAGGTTATCCGCAACAAGCATACTGGGCTATCAGAGGGTTATGGATTTGTGGAATTTCATTCACATGCCACAGCTGAGAAAGTTCTGCAGAGTTATGCTGGAATTTTGATGCCCAACACTGAGCAACCTTTCCGCCTGAACTGGGCAACCTTTAGCACAGCTGACAAGTCTTCAGACAATGTTCCTGATCTTTCTATTTTTGTAGGAGATTTAGCTGCAGATGTTACTGATAGCATGTTGCATGAAACTTTTGCTAGTGTGTTTCCTTCTGTTAAGGCTGCAAAGGTTGTTTTTGATGCCAACACTGGCCGTTCGAAGGGCTATGGTTTTGTCAGGTTTGGGGATGACAGTGAGAGGACTAAGGCTATGACTCAGATGAATGGTGTTTACTGCTCTAGCAGGCCTATGCGTATTGGTGCTGCAACTCCAAGGAAATCTGCTGGCCATCAACAAGGAAGCCAAGCAAATGGCACATCCAGCCAATCTGAAGCAGATTCAACAAACACAACTATATTTGTTGGAGGACTCGACCCTGATGTCACAGATGAAGATCTTAGGCAACCATTCTCCCAATATGGCGAGATAGTCTCTGTTAAGATACCTGTTGGAAAGGGGTGTGGTTTTGTCCAATTTGCAAGCAGACCTAATGCTGAAGAGGCATTGCAAAAGCTTAATGGGACCATGATCGGCAAGCAAACAGTTCGCCTTCATTGGGGCCGCAATCCAGCAAATAAGCAGCATAGGATGGATTATGGCAACACCTGGAATGGAGGGTATTACGGGGCTCCTATTTATGATGGTTACGGATACGCGTTGCCGCCACCTCATGATCCAACCATTTATGCAGCTGCATATGGTGCTTACCCCTACTATGGAGGACACCAACAGCAAGTAAGCTGA 1314 0.4977 MEQSNGSDSSQQPPSTEQNQQPQPQQQQQRQPQAPPQPVAVPQQWMPMQYPAAAMVMQHRMMPPPPPPQHYAPPHYVPYHHHQYHVPPHVTHHQQNQYQNGSNGGENNKTVWIGDLHHWMDENYLHRCFASTGEIFSIKVIRNKHTGLSEGYGFVEFHSHATAEKVLQSYAGILMPNTEQPFRLNWATFSTADKSSDNVPDLSIFVGDLAADVTDSMLHETFASVFPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTKAMTQMNGVYCSSRPMRIGAATPRKSAGHQQGSQANGTSSQSEADSTNTTIFVGGLDPDVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFASRPNAEEALQKLNGTMIGKQTVRLHWGRNPANKQHRMDYGNTWNGGYYGAPIYDGYGYALPPPHDPTIYAAAYGAYPYYGGHQQQVS* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0818 437 MobiDBLite consensus disorder prediction 1 40 - -
Aev07g0818 437 PANTHER POLYADENYLATE-BINDING PROTEIN RBP47C-RELATED 38 436 - -
Aev07g0818 437 Gene3D - 292 408 IPR012677 -
Aev07g0818 437 PANTHER TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED 38 436 - -
Aev07g0818 437 SUPERFAMILY RNA-binding domain, RBD 297 407 IPR035979 GO:0003676
Aev07g0818 437 CDD RRM3_NGR1_NAM8_like 306 377 - -
Aev07g0818 437 SUPERFAMILY RNA-binding domain, RBD 75 191 IPR035979 GO:0003676
Aev07g0818 437 SMART rrm1_1 203 277 IPR000504 GO:0003723
Aev07g0818 437 SMART rrm1_1 308 375 IPR000504 GO:0003723
Aev07g0818 437 SMART rrm1_1 110 185 IPR000504 GO:0003723
Aev07g0818 437 MobiDBLite consensus disorder prediction 1 28 - -
Aev07g0818 437 Gene3D - 108 188 IPR012677 -
Aev07g0818 437 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 202 281 IPR000504 GO:0003723
Aev07g0818 437 MobiDBLite consensus disorder prediction 279 310 - -
Aev07g0818 437 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 307 379 IPR000504 GO:0003723
Aev07g0818 437 CDD RRM1_SECp43_like 110 190 - -
Aev07g0818 437 CDD RRM2_SECp43_like 201 280 - -
Aev07g0818 437 Gene3D - 190 291 IPR012677 -
Aev07g0818 437 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 109 189 IPR000504 GO:0003723
Aev07g0818 437 MobiDBLite consensus disorder prediction 284 310 - -
Aev07g0818 437 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 111 178 IPR000504 GO:0003723
Aev07g0818 437 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 204 273 IPR000504 GO:0003723
Aev07g0818 437 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 309 372 IPR000504 GO:0003723
Aev07g0818 437 SUPERFAMILY RNA-binding domain, RBD 184 296 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0818 Aev-Chr7 5534935 5538731 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev07g0818 111 387 Eukaryotic Initiation Factors Gene Family AT2G23350 28.472 2.60e-31 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0818 07 5534935 5538731 Aev07g0818 07 5534935 5538731 ECH
Aev07g0818 07 5534935 5538731 Aev08g0332 08 1803965 1806845 PCT