Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0800 ATGGCGAAAGTGAGTAGCGCCACCGACGACGGTGAGCTCCGGCGAGCTTGCACGGCGGCGATTGAGGACCCAAATCAAAAGATCGTGATGGCGATCAGGGTTGCAAAGTCACATGGGATCTTGGGAAAGTCCTCCAAGATTGGTCGCCAAATGGCCAAGCCTAGGGTTCTCGCTCTCTCCACAAAATCGGAAGGTCAGAGGACAACAGCTTTTCTTCGAGTTCTGAAGTACTCTACGGGAGGGGTTCTTGAGCCTGCAAAACTATACAAGCTGAGGCACCTTTCAAAAGTGGAAGTCGTAACAAATGATCCTAGTGGATGTACATTTACACTGGGATTTGATAACCTTCGAGGCCAAAGTGTGGCTCCTCCTCAGTGGACCATGCGCACTATTGATGACAGGAATCGCCTCATTTTTGGTATCTTAAACATCTGCAAAGATGTTTTGGGTCGCCTTCCTAAGGTTGTTGGTATAGATGTTGTGGAGATGGCTCTTTGGGCTAAGGAAAATACACCCTCAGTTACTACTCAGAGTAAAGTGCAAGATGGTGTTCCTGTTGCATCTGTTGTGGCTGAGACGGAATTGAAAGTCAATGTTGAGAAAGAACTTGTTTCCCAGGCAGAGGAAGAGGACATGGAGGCTCTTTTGGGAACTTATGTCATGGGTATTGGTGAGGCAGAGGCATTCTCTGAAAGGTTGAAGAGAGAGCTTCAGGCTCTGGAAGCAGCAAATGTGCATGCCATTTTAGAAAGTGAACCTTTGATGGACGAGGTGATGCAAGGGCTTGAGGCAGCAACAAATTGTGTGGAAGACATGGATGAATGGTTAGGCATATTCAATCTGAAACTCCGGCACATGAGAGAGGACATTGAATCGATAGAAACCCGCAACAACAAATTGGTAATGCAATCAGTAAATAACAAATCTCTCATTGAGGAGCTTGATAAGCTGCTTGAACGATTGAACGTCCCTTCTGAGTATGCAGCATCTTTAACAGGAGGTTCATTTGATGAGGCTCGAATGCTTCAAAATGTAGAAGCATGTGAATGGTTGACTGGTGCCTTGCGTGGTATAGAAGCGCCAAATCTAGACCCTGCATATGCAAACATGAGAGCTGTTAAAGAGAAGCGTGCAGAACTTGAAAAATTAAAATCTACTTTTGTCAAGAGAGCTTCTGAATTCTTGAGAAGCTACTTTGCTAGTTTGGTGGACTTCATGATAAGTGATAAAACTTACTTTTCTCAGCGAGGACAGTTAAAGAGGCCGGATCATGCGGACCTGCGGTACAAATGCAGGACGTATGCACGTCTTCTACAACACTTAAAGAGCCTGGACAAGAATTGCTTGGGTCCATTGAGAAAAGCTTATTGCAGTTCTTTAAACTTGCTTCTTCGCAGAGAGGCTCGTGAGTTTGCAAATGAACTTCGTGCTAGTACCAAAGCCTCTAGAAATCCCACTGTTTGGCTTGAAGGTTCGACAGGTTCTGGTCAGAATGTAAATGCTACTGACACTTCTACAGTCTCCGATGCTTATGCGAAAATGCTCACGATTTTTATCCCACTTTTGGTGGATGAGAGTTCGTTTTTTGCACACTTCATGTGCTTCGAAGTTCCTACACTTGTTCCTCCGGGAGGTGTTGTTAACGGTAATAAAAATGGGTATGATGATGATGATGATTTGGGGATTATGGATATTGATGACAATGACAGTAAATCCGGTAAAAATTCTGCGGAGCTTGCAGCTTTAAATGAATCTCTTCAAGATTTGCTTGATGGAATTCAAGAAGATTTTTATGCTGTTGTGGATTGGGCATACAAAATTGATCCTTTGCGCTGCATATCCATGCATGGAATAACAGAACGTTATCTTTCTGGTCAGAAAGCTGATGCAGCGGGATTTGTACGCCTTTTGCTTGGTGACCTGGAGGCTCGTATATCTATGCAGTTCAGCCGTTTTGTTGATGAAGCTTGTCATCAAATTGAAAGAAACGAACGCAATGTTCGCCAAATGGGTGTCCTATCCTACATTCCCAGATTTGCAACCCTTGCAACACGGATGGAGCAGTACATTCAGGGACAGTCTAGGGATTTGGTTGACCAAGCATACACAAAATTTGTTAGTATAATGTTTGCAACTTTGGAAAAAATTGCACAAACGGATCCGAAATACGCTGATATTTTTCTTCTAGAGAATTACGCAGCCTTTCAGAATAGTTTGTATGACCTTGCCAATATTGTGCCTACATTGGCCAAGTTCTATCATCAGGCCAGTGAAGCATATGAACAAGCTTGCACGCGCCATATTAGCACGATTATCTATTATCAATTTGAGCGCCTCTTCCAATTCGCTCGAAGGATCGAGGACTTGATGTTCACTGTTGCACCTGAAGAGATTCCTTTCCAGCTCGGGCTGTCGAAAATGGATCTTCGGAAGATGTTAAAATCGAGCTTATCCGGGGTTGACAAGTCTATTGCTGCAATGTATAAGAAACTTCAGAAGAATTTGACTTCAGAGGAATTATTACCCTCCTTATGGGACAAATGCAAGAAGGAATTTCTTGACAAGTACGAAAGTTTTGCACAACTTGTGGCTAAGATTTACCCTAATGAGACAATCCCTTCTGTAGCAGAGATGAGAGAGCTTTTAGCCTCCATGTAA 2658 0.4353 MAKVSSATDDGELRRACTAAIEDPNQKIVMAIRVAKSHGILGKSSKIGRQMAKPRVLALSTKSEGQRTTAFLRVLKYSTGGVLEPAKLYKLRHLSKVEVVTNDPSGCTFTLGFDNLRGQSVAPPQWTMRTIDDRNRLIFGILNICKDVLGRLPKVVGIDVVEMALWAKENTPSVTTQSKVQDGVPVASVVAETELKVNVEKELVSQAEEEDMEALLGTYVMGIGEAEAFSERLKRELQALEAANVHAILESEPLMDEVMQGLEAATNCVEDMDEWLGIFNLKLRHMREDIESIETRNNKLVMQSVNNKSLIEELDKLLERLNVPSEYAASLTGGSFDEARMLQNVEACEWLTGALRGIEAPNLDPAYANMRAVKEKRAELEKLKSTFVKRASEFLRSYFASLVDFMISDKTYFSQRGQLKRPDHADLRYKCRTYARLLQHLKSLDKNCLGPLRKAYCSSLNLLLRREAREFANELRASTKASRNPTVWLEGSTGSGQNVNATDTSTVSDAYAKMLTIFIPLLVDESSFFAHFMCFEVPTLVPPGGVVNGNKNGYDDDDDLGIMDIDDNDSKSGKNSAELAALNESLQDLLDGIQEDFYAVVDWAYKIDPLRCISMHGITERYLSGQKADAAGFVRLLLGDLEARISMQFSRFVDEACHQIERNERNVRQMGVLSYIPRFATLATRMEQYIQGQSRDLVDQAYTKFVSIMFATLEKIAQTDPKYADIFLLENYAAFQNSLYDLANIVPTLAKFYHQASEAYEQACTRHISTIIYYQFERLFQFARRIEDLMFTVAPEEIPFQLGLSKMDLRKMLKSSLSGVDKSIAAMYKKLQKNLTSEELLPSLWDKCKKEFLDKYESFAQLVAKIYPNETIPSVAEMRELLASM* 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0800 885 SMART Sec3_PIP2_bind_2 50 148 IPR028258 -
Aev07g0800 885 Coils Coil 190 210 - -
Aev07g0800 885 PANTHER SEC3/SYNTAXIN-RELATED 5 885 - -
Aev07g0800 885 Coils Coil 283 303 - -
Aev07g0800 885 Coils Coil 223 250 - -
Aev07g0800 885 Pfam Exocyst complex component SEC3 N-terminal PIP2 binding PH 51 146 IPR028258 -
Aev07g0800 885 PANTHER EXOCYST COMPLEX COMPONENT SEC3B 5 885 - -
Aev07g0800 885 Pfam Exocyst complex component Sec3 226 487 IPR019160 GO:0000145|GO:0006887
Aev07g0800 885 Pfam Exocyst complex component Sec3 576 869 IPR019160 GO:0000145|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0800 Aev-Chr7 5353882 5362014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev07g0800 07 5353882 5362014 Aev07g0800 07 5353882 5362014 ECH
Aev07g0800 07 5353882 5362014 Aev08g0305 08 1653202 1666199 PCT