LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aev07g0750	ATGATGCCATTGAGGAATATTGTGAGGGAGCTCAAAGAGCAAATTGGTGAGGGCATTAGCAACATGTATAGAAGAAGAGGAACAGAATCATCAAAGCATCATCATCATCATCATCATCATGTTCATCATCATCATAGACATGGAAAGTCTCACATAGCTCCTGAATGTTCATCACCATCATTAACATCATCATCATCATCCATCATGGTGGTGAGTGATCAAAGCCAGTGGGCTAATCTACCACCAGAGTTGCTATTAGACATAATCCAAAGGGTGGAAGCAAGTGAAGTTTCATGGCCTTCAAGGAGAGTACTTGTGGCATGTGCCTCAGTTTGTAGGACTTGGAGGGACATTACATTGAATGTGGTTAAGACACCACAACACTCTGGTTGCCTCACTTTCCCTATATCACTCAAGCAGCCTGGTCCAAGAGACAATCCAATACAGTGTTTTATTAAGAGAGAAAGGGTCACTTCAACATATCGTTTATACCTTGGTCTGAGCCCTGCTCTTTCTGGTGACATGAGCAAACTCCTTTTAGCAGCAAAGAAGATCAGAAGAGCAACATGTACTGAATTTTTAGTATCATTGGTCGCCGACGATTTCTCTCGCGCGAGCAATACTTACATCGGAAAACTAAGGTCTAATTTTCTCGGCACCAAGTTTATGATCTTGGATGGACACGCCCCCCATGATTCATCGCTTCCATTGAATTGCAAGTTGCAGCATAGAGTTCATATGAAGCAAGTACTTCCAAGGCATGCACCTGCTAACTACAATGTGGCAACAATTTCTTATGAACTCAATGTTCTTCGGACGAGAGGTCCTCGGCGAATGCGGTGCACAATGCACTTGATTCCTATGTCTGCAATTGAAGAAGGAGGAATTGCTCCTACTCCTTCAAAGTTCAATGATTGTCTTAACGAGTATCCACCGACGACAACAATTTCCAAAGGGAAGAAATCAGGTGTTGACTTTGACTCTGCCGGTACTATTAGTACTCCTGAACAGACCTTTAGTGCGAGAGAACCGTTGATTTTGAAAAACAAGGCTCCTAGATGGCATGAACAATTGCAATGTTGGTGCTTGAATTTCAAGGGACGAGTCACGGTGGCGTCCGTGAAGAATTTTCAGCTCGTAGCGGCTGCAGATCCTTCCCAAAACGTTCCGGCTGCAGAACAAGAGAAAGTTATTCTGCAGTTCGGAAAAATTGGGAAGGATATATTCACCATGGATTACCGGTATCCACTTTCTGCTTTTCAAGCATTTGCAATATGCTTAAGCAGCTTTGACACTAAACCGGCTTGTGAATGA	1314	0.4323	MMPLRNIVRELKEQIGEGISNMYRRRGTESSKHHHHHHHHVHHHHRHGKSHIAPECSSPSLTSSSSSIMVVSDQSQWANLPPELLLDIIQRVEASEVSWPSRRVLVACASVCRTWRDITLNVVKTPQHSGCLTFPISLKQPGPRDNPIQCFIKRERVTSTYRLYLGLSPALSGDMSKLLLAAKKIRRATCTEFLVSLVADDFSRASNTYIGKLRSNFLGTKFMILDGHAPHDSSLPLNCKLQHRVHMKQVLPRHAPANYNVATISYELNVLRTRGPRRMRCTMHLIPMSAIEEGGIAPTPSKFNDCLNEYPPTTTISKGKKSGVDFDSAGTISTPEQTFSAREPLILKNKAPRWHEQLQCWCLNFKGRVTVASVKNFQLVAAADPSQNVPAAEQEKVILQFGKIGKDIFTMDYRYPLSAFQAFAICLSSFDTKPACE*	438

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aev07g0750	437	PANTHER	TUBBY-LIKE F-BOX PROTEIN	2	437	-	-
	Aev07g0750	437	SUPERFAMILY	F-box domain	68	120	IPR036047	GO:0005515
	Aev07g0750	437	PANTHER	TUBBY-RELATED	2	437	-	-
	Aev07g0750	437	Pfam	F-box domain	77	121	IPR001810	GO:0005515
	Aev07g0750	437	Gene3D	-	72	124	-	-
	Aev07g0750	437	MobiDBLite	consensus disorder prediction	27	60	-	-
	Aev07g0750	437	SUPERFAMILY	Tubby C-terminal domain-like	126	437	IPR025659	-
	Aev07g0750	437	MobiDBLite	consensus disorder prediction	28	50	-	-
	Aev07g0750	437	Gene3D	Tubby Protein; Chain A	136	437	IPR025659	-
	Aev07g0750	437	ProSitePatterns	Tub family signature 2.	422	437	IPR018066	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	365	381	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	258	285	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	209	233	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	347	364	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	394	413	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	415	437	IPR000007	-
	Aev07g0750	437	PRINTS	Tubby superfamily signature	193	209	IPR000007	-
	Aev07g0750	437	ProSitePatterns	Tub family signature 1.	365	378	IPR018066	-
	Aev07g0750	437	Pfam	Tub family	138	432	IPR000007	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aev07g0750	Aev-Chr7	4965800	4968558	Dispersed/Wgd

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	TUB	Aev07g0750		Tub	2.7e-103	CL0395

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Aev07g0750	07	4965800	4968558	Aev07g0750	07	4965800	4968558	ECH