Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev07g0703 ATGGCGGTGGAGAATCCAGAGGACGGGTTGAAGAAGAAGCTGGAGTACCTCTCTCTCGTTTCCAAGGTGTGCACCGAATTGGAATCCCACACTGGAACCGGCGACAAGGTTTTAGCTGAGTTCATCACTGAGTTGGGTCGATCCTCCGAAACCGTCGAAGAATTCGATTCCAAATTGAAGGAAAACGGTGCTGAAATGCCCGATTACTTCGTTCGCACGCTCCTTACTATAATCCACGCTATTCTCCCTCCTAAGAAGGCTTCTGATATTAGCAATAAGGGTTCGAAGCAAAACGACGCCGGTTCGAAGACCAAGTTCAAGGCACTAGCCATTGCGGATGATAGGGATAGGGTTAAGGATCTGCAGAAGGAGATTGAAGAAGAAGCCAAGGAAAAACCCGGTGCTGAAGATGGGTTCAGAGAAAGAGAGAGAAATGGCGAAGATGGGTTCAGAGGCAGAGATCGAGACAGAGACAGAGACAGAGGAAGAGACAGAAGAGAAAGAAGGGACAGGTATGACAAACATGATAGAGATGAAAGGCATAGAGATAGAAATAGAGATAGAGATAGTAGAGATAATAGAGATTATGATGATGGTTATGATGATGATGGTGGAAGAAGGGATTATAGGAGAAAGGGGAGGGATAGAGAAAATGATAGAGATAGGGATAGGGATAAGGATAGATATGAGAGGCGTAGGAGAGATGAAGAGAATGATAGAAACGGTGAGGAAGATGGTGGTGGTGTTGAGAGGAAAGGAAAGAGAGATTTGAGGCGTGATGGGGCTGGTGGTGGTGGTGGTGAGATTGAGTTGTATAAGGTTTATAAAGGCAGGGTTTCAAGGGTCATGGACACGGGGTGCTTTGTGCAGTTGGATGATTTCAGAGGGAAGGAAGGGTTGGTGCACATCTCGCAAATTGCAACTAGGAGGATTACTAATGCCAAGGATGTGGTGAAGCGGGATCAGGAGGTTTTTGTGAAGGTGATATCAATGTCGGGTCAGAAGTTGAGTTTGTCAATGAGGGATGTGGATCAGCATACTGGGAAGGATCTTCTTCCCTTGAAGAAGAGCTCGGAGGAGGATGGGTTTAGGATGAATCCACAGGGTTCAAAGGATGGCCCAGTTGCAAGGACTGGTCTCTCAGGTATCAGGATTGTGGAGGAGGAGGATATGGGTTCTTCGAGGAGGCCTTTGAAGAGGATGAGCTCTCCGGAGAGGTGGGAGGCGAAGCAGTTGATTGCCTCAGGTGTTTTGAGTGTTTCGGAGTATCCTACATATGATGATGAGGGAGATGGGCTAATGTACCAGGAGGAAGGTGCTGAGGAAGAGCTCGAGATCGAGTTGAATGAAGATGAGCCTGCGTTCTTGCAAGGCCAGAGCAGGTATTCCATGGATATGTCACCTGTTAAGATATTTAAGAATCCAGAAGGCTCTCTGGGTCGTGCTGCTGCACTCCAATCTGCACTTATAAAGGAGCGCAGAGAAGTACGTGAACAACAGCAGCGCACCATGCTTGATTCAATTCCAAAGGATCTCAATCGTCCTTGGGAAGACCCTATGCCAGAGAGTGGTGAAAGGCATCTTGCCCAGGAGCTTAGGGGTGTTGGCTTATCAGCCTATGATATGCCAGAGTGGAAAAAAGATGCTTATGGGAAGACCATTACTTTTGGGCAAAGGTCAAAGCTTTCTATTCAGGAACAGAGGCAGAGTTTGCCAATCTACAAGTTGAAAAAAGAATTGATTCAGGCTGTCCATGATAATCAGGTGTTGGTGGTGATTGGTGAAACTGGTTCAGGTAAAACGACTCAGGTTACGCAGTATCTTGCTGAAGCAGGTTACACCACCAGAGGTAAAATTGGATGCACTCAACCACGTAGGGTGGCTGCAATGTCAGTTGCTAAGAGAGTGGCAGAAGAGTTTGGTTGTCGACTGGGAGAGGAAGTTGGTTATGCCATTCGGTTTGAGGATTGTACTGGACCAGATACTGTAATCAAGTACATGACAGATGGTATGCTTCTTAGGGAAATACTGGTTGATGAGAACCTGTCACAGTATTCAGTTATCATGCTTGATGAAGCCCATGAAAGGACTATTCATACTGATGTTCTTTTTGGACTGTTAAAGCAGCTAGTGCAGCGCAGACCTGAGATGCGATTGATTGTCACATCTGCTACGCTCGATGCAGAGAAGTTCTCAGGATATTTCTTTAACTGCAACATCTTTACTATTCCTGGGAGAACTTTCCCTGTCGAGATTCTTTACACTAAGCAGCCAGAAAGTGATTACTTAGATGCAGCTTTAATCACTGTCCTACAGATCCACTTGACAGAACCGGAAGGAGACGTTCTTCTCTTCTTGACAGGTCAGGAGGAGATTGATTTTGCTTGCCAATCCCTCTACGAGAGAATGAAGGGATTGGGTAAGAATGTTCCAGAACTGATCATATTACCTGTATATAGTGCACTTCCTAGTGAAATGCAATCTAGGATATTTGACCCTGCGCCTCCTGGGAAAAGAAAAGTGGTTGTGGCTACTAATATTGCTGAGGCTTCTTTGACTATTGATGGGATATTTTATGTCATTGATCCTGGGTTTGCAAAGCAAAATGTTTATAACCCAAAGCAAGGTCTTGATTCTTTGGTTATAACTCCGATTTCGCAAGCTTCAGCGAAACAAAGAGCTGGACGTGCAGGGCGTACTGGACCTGGGAAATGCTATCGCCTCTACACTGAGAGTGCATATAGGAATGAAATGTCCCCGACTACAATTCCTGAGATTCAAAGGATAAATCTTGGGATGATAACTCTTAGTATGAAAGCTATGGGAATAAATGATCTTCTGTCCTTTGATTTTATGGATCCACCATCACCCCAAGCTCTTATATCTGCCATGGAACAGCTTTACAGTCTTGGAGCATTGGATGAGGAGGGCCTTTTAACCAAATTGGGGAGGAAAATGGCAGAATTTCCTTTGGATCCACCGTTGTCGAAAATGTTACTTGCCAGTGTAGACCTTGGATGCAGTGATGAGATTTTGACCATAATTGCCATGATTCAGACTGGTAATATCTTCTACCGACCTAGGGAAAAGCAAGCCCAAGCAGATCAGAAGAGGGCAAAGTTTTTCCAGCCTGAGGGGGACCATCTTACTCTGCTTGCGGTTTACGAGGCGTGGAAAGCCAAGAATTTTTCAGGGCCCTGGTGTTTTGAGAACTTTGTCCAATCCCGATCATTGAGAAGAGCGCAGGATGTCAGGAAACAGCTTCTCACCATTATGGACAGGTACAAATTGGACGTCGTAAGTGCTGGAAAAAACTTCACGAAGATCAGGAAGGCTATCACCGCAGGATTCTTTTTCCACGCAGCAAGAAAGGATCCCCAGGAAGGTTACAGAACCCTCGTTGAGAACCAGCCGGTATATATCCATCCGAGCTCGGCTTTGTTCCAGAGGCAACCAGATTGGGTCATCTACCATGAACTTGTGATGACAACTAAGGAATATATGCGCGAGGTCACCGTGATAGACCCCAAATGGCTCGTCGAATTGGCACCAAGATTCTTCAAAGTTTCAGATCCTACAAAGATGAGCAAGCGAAAGCGTCAAGAGCGTATCGAACCGCTCTATGATCGATACCACGAGCCAAATTCATGGCGTTTGAGTAAACGCCGTGCCTGA 3675 0.4582 MAVENPEDGLKKKLEYLSLVSKVCTELESHTGTGDKVLAEFITELGRSSETVEEFDSKLKENGAEMPDYFVRTLLTIIHAILPPKKASDISNKGSKQNDAGSKTKFKALAIADDRDRVKDLQKEIEEEAKEKPGAEDGFRERERNGEDGFRGRDRDRDRDRGRDRRERRDRYDKHDRDERHRDRNRDRDSRDNRDYDDGYDDDGGRRDYRRKGRDRENDRDRDRDKDRYERRRRDEENDRNGEEDGGGVERKGKRDLRRDGAGGGGGEIELYKVYKGRVSRVMDTGCFVQLDDFRGKEGLVHISQIATRRITNAKDVVKRDQEVFVKVISMSGQKLSLSMRDVDQHTGKDLLPLKKSSEEDGFRMNPQGSKDGPVARTGLSGIRIVEEEDMGSSRRPLKRMSSPERWEAKQLIASGVLSVSEYPTYDDEGDGLMYQEEGAEEELEIELNEDEPAFLQGQSRYSMDMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESGERHLAQELRGVGLSAYDMPEWKKDAYGKTITFGQRSKLSIQEQRQSLPIYKLKKELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREILVDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVQRRPEMRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDVLLFLTGQEEIDFACQSLYERMKGLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPGFAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIPEIQRINLGMITLSMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGRKMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQPEGDHLTLLAVYEAWKAKNFSGPWCFENFVQSRSLRRAQDVRKQLLTIMDRYKLDVVSAGKNFTKIRKAITAGFFFHAARKDPQEGYRTLVENQPVYIHPSSALFQRQPDWVIYHELVMTTKEYMREVTVIDPKWLVELAPRFFKVSDPTKMSKRKRQERIEPLYDRYHEPNSWRLSKRRA* 1225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev07g0703 1224 SMART helicmild6 797 901 IPR001650 -
Aev07g0703 1224 SMART ultradead3 569 753 IPR014001 -
Aev07g0703 1224 Pfam S1 RNA binding domain 273 339 IPR003029 GO:0003676
Aev07g0703 1224 Pfam DEAD/DEAH box helicase 577 727 IPR011545 GO:0003676|GO:0005524
Aev07g0703 1224 Gene3D - 267 352 IPR012340 -
Aev07g0703 1224 SMART S1_6 270 341 IPR022967 -
Aev07g0703 1224 Pfam Helicase conserved C-terminal domain 769 901 IPR001650 -
Aev07g0703 1224 Gene3D - 946 1045 - -
Aev07g0703 1224 Coils Coil 111 131 - -
Aev07g0703 1224 SMART ha2_5 962 1052 IPR007502 GO:0004386
Aev07g0703 1224 Gene3D - 543 746 IPR027417 -
Aev07g0703 1224 ProSitePatterns DEAH-box subfamily ATP-dependent helicases signature. 686 695 IPR002464 -
Aev07g0703 1224 Coils Coil 482 502 - -
Aev07g0703 1224 SUPERFAMILY Nucleic acid-binding proteins 271 348 IPR012340 -
Aev07g0703 1224 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 762 942 IPR001650 -
Aev07g0703 1224 PANTHER - 213 1224 - -
Aev07g0703 1224 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 561 1094 IPR027417 -
Aev07g0703 1224 ProSiteProfiles S1 domain profile. 272 341 IPR003029 GO:0003676
Aev07g0703 1224 Gene3D - 747 921 IPR027417 -
Aev07g0703 1224 Pfam Helicase associated domain (HA2) 963 1051 IPR007502 GO:0004386
Aev07g0703 1224 MobiDBLite consensus disorder prediction 108 263 - -
Aev07g0703 1224 CDD DEXHc_DHX8 566 744 IPR044762 GO:0000398|GO:0003724|GO:0005524
Aev07g0703 1224 MobiDBLite consensus disorder prediction 85 268 - -
Aev07g0703 1224 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 581 744 IPR014001 -
Aev07g0703 1224 CDD SF2_C_RHA 748 909 - -
Aev07g0703 1224 CDD S1_DHX8_helicase 272 348 - -
Aev07g0703 1224 Pfam Oligonucleotide/oligosaccharide-binding (OB)-fold 1109 1184 IPR011709 -
Aev07g0703 1224 PANTHER ATP-DEPENDENT RNA HELICASE 213 1224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev07g0703 Aev-Chr7 4559084 4563057 Dispersed