Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3757 ATGTTGGAAGCAAAGGACCCGGCGATCAAGCTCTTCGGGATGACGATCCCGGTGCCGGAGATGTATTCCGGCGCCGGAGACACTGACGGAGCTCTGGCACCGTCATGTGGTGATGTGGTTGATGACCGTTTTGATCAGAATAACGCATCTCCCGCCAACTCTACGAGCAGCGATACACAAGAGCAAGAAGAGATTGAGAACAAGGATACATCGGGAGAGAAACCAATTGATGAAAAGAAGGAAGATGGAGCCCCTACGCAATCATCAGAAGAGTTCACCAATCAGGATGCAACTTCTAGAACCGGCGGCGAAGAATCTATTACCACATCCACTGAGAAGGAGGCTACAACATTGAAGACTTCAAAGACTGAAGAAGAACACACCGAGACAAGTGATTCGCAAGATAAGACCCTAAAAAAGCCAGACAAAATACTGCCTTGTCCCCGCTGTAGTAGCATGGACACCAAGTTCTGCTACTACAACAACTATAATGTAAACCAACCTCGCCACTTCTGCAAGAATTGCCAGAGATACTGGACTGCAGGTGGAACCATGAGGAATGTGCCTGTAGGTGCTGGTCGTAGGAAGAACAAGAACTCTGCTTCTCACTATCGTCAAATAACCGTCTCCGAAGCAGCACTCCAGAACACTCGGAAAGACTTTCCAAATGGAGTCCACCATCCTACCTTGAAGTGCAATGGCACAGTCCTTACATTTGGGTCTGATGCACCCTTGTGCGAATCAATGGCGTCTGTTTTGAATCTTTCAGATAAATCAGTGCATAATTACCTAAGGAATGGATATCATAAACCTGAAGAACTAAGGGTTCCTGCTCCCTATGCCAATGGAGAAAAGGGTGATGATCAATCCAGTAAATCTTCTGTTAGTTCCACAAAGTCAATGGAAGGTACAAGCATCAAAAGTTCCCAAGAACAAACAATTCCAAGTGGTCAGAGCTTCCCACCACAAATGCCCTACTTTCCCGGCCCTCCTTGGTCTTTCCCATGGAATCCAGCACAGTGGAACTCTTCAGTACCGCCACCTACTTTTTGCCCACCAGGATTCTCCATGCCATTTTATCCTGCAACAGCTTATTGGGGCTGTACCGTTTCAGGCGCATGGAACATGCCGTGGCTAGCACAACCATCGTCGCCTAATGCTGCAGCCGCTAATTCCAGCGGTCCTAACTCCCCAACCTTGGGCAAACATTCAAGGGAAGAAAACATGACTAAATCAAATGACTTAGGCGGTGAGGATGGAGATGAACATAGGAAAGAGGATGACAAAGAAAAGTCCCTTTGGGTTCCAAAAACATTGAGGATTGATGACCCGGGAGATGCAGCAAAGAGCTCTATATGGACAACGCTTGGGATCAGACATGATAAAGATGACTCGGTTCCTGGGGGAGGACTCTTTAAAGCATTCCCTTCAAAGTACCATGAAAAAAATCATCCAATGCAAGCCTCGCCGGTCTTGCAGGCCAATCCGGCAGCGTTGTCTAGGTCACTTAACTTTCACGAGACTTCATAA 1530 0.4732 MLEAKDPAIKLFGMTIPVPEMYSGAGDTDGALAPSCGDVVDDRFDQNNASPANSTSSDTQEQEEIENKDTSGEKPIDEKKEDGAPTQSSEEFTNQDATSRTGGEESITTSTEKEATTLKTSKTEEEHTETSDSQDKTLKKPDKILPCPRCSSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSASHYRQITVSEAALQNTRKDFPNGVHHPTLKCNGTVLTFGSDAPLCESMASVLNLSDKSVHNYLRNGYHKPEELRVPAPYANGEKGDDQSSKSSVSSTKSMEGTSIKSSQEQTIPSGQSFPPQMPYFPGPPWSFPWNPAQWNSSVPPPTFCPPGFSMPFYPATAYWGCTVSGAWNMPWLAQPSSPNAAAANSSGPNSPTLGKHSREENMTKSNDLGGEDGDEHRKEDDKEKSLWVPKTLRIDDPGDAAKSSIWTTLGIRHDKDDSVPGGGLFKAFPSKYHEKNHPMQASPVLQANPAALSRSLNFHETS* 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3757 509 ProSiteProfiles Zinc finger Dof-type profile. 145 199 IPR003851 GO:0003677|GO:0006355
Aev06g3757 509 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 508 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 286 320 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 404 431 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 87 116 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 23 143 - -
Aev06g3757 509 ProSitePatterns Zinc finger Dof-type signature. 147 183 IPR003851 GO:0003677|GO:0006355
Aev06g3757 509 MobiDBLite consensus disorder prediction 61 86 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 274 324 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 383 403 - -
Aev06g3757 509 PANTHER CYCLIC DOF FACTOR 2 1 508 IPR045174 GO:0003700|GO:0006355
Aev06g3757 509 Pfam Dof domain, zinc finger 142 199 IPR003851 GO:0003677|GO:0006355
Aev06g3757 509 MobiDBLite consensus disorder prediction 383 431 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 117 143 - -
Aev06g3757 509 MobiDBLite consensus disorder prediction 46 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3757 Aev-Chr6 37726830 37729262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3757 6 509 C2C2-Dof Transcription Factor Family AT5G39660 44.571 2.46e-112 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev06g3757 zf-Dof 4.7e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g3757 - - aprc:113862693 741.11