Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g3418 ATGCGGATGAGCTGCAATGGATGCAGGGTGCTACGGAAAGGGTGTAGCGAGAATTGCAGCATAAGGCCATGCTTACAGTGGATCAAGAGCCCCGAATCACAAGCCAATGCCACCGTCTTCCTCGCCAAGTTCTATGGCCGCGCTGGACTCATGAATCTCGTCAACGCTGGCCCCGAACACCTTCGTCCTGCGATTTTTCGCTCGTTGCTGTACGAGGCATGCGGTCGGATCGTGAACCCAATCTACGGTTCGGTGGGTTTGCTGTGGTCAGGGAGCTGGCAGCTCTGCCAAGCCGCCGTTGAAGCCGTCTTGAAAGGCGCGCCGATCACGCCGATTACCTCCGAAGCCGCCGCTAACGGGCGGGGCCCACCCCTCAAGCCATACGACATACGCCACGTGTCCAAGGATGAATCCAACTCGGCTGCGTCGACTCAGCAGCAGCGAGTCAAGACTCGCTCCCGCGTCAAGAAGCGGACGCAGTCGCAATCCCAACCCAAGCCAAAAGAAGGCAACGAAGAAGACAAGGAAACTGGGACTGAGTTGGTTCACCTCGAATCGGACTCCGGTCACGATGATGAGGGGGCGAACCGATCTGCGAGTCACGACTCGTCGCTGAGTCACCTGTCCGAGTTGGCCACAGTTGCGGAGGAAGAGAGCAAAGAGAGCGAGAGCACCGTGGATACTGCAGAGGCTTCGGTTCTTTTTCTGGATGAACCGGAATCGAACCGGAAGCGCGTGGACCGAACCGATGAGGGTGGGGATGCTGGTGTTGGTCTTGAGCTGAGGCTTGGGTTCGAACCGGTGGTTGTCTCTTCGTCACGTGCGGATCACGTGGTGGTTCCGGTCAAGAAGAGAAGAATTGAATTGATGGATTGTGGGCTTGGGCTTCAGTGA 894 0.5749 MRMSCNGCRVLRKGCSENCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLVNAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAAANGRGPPLKPYDIRHVSKDESNSAASTQQQRVKTRSRVKKRTQSQSQPKPKEGNEEDKETGTELVHLESDSGHDDEGANRSASHDSSLSHLSELATVAEEESKESESTVDTAEASVLFLDEPESNRKRVDRTDEGGDAGVGLELRLGFEPVVVSSSRADHVVVPVKKRRIELMDCGLGLQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g3418 297 PIRSF AS2 1 292 IPR017414 -
Aev06g3418 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 274 - -
Aev06g3418 297 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 274 - -
Aev06g3418 297 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Aev06g3418 297 MobiDBLite consensus disorder prediction 237 255 - -
Aev06g3418 297 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Aev06g3418 297 MobiDBLite consensus disorder prediction 114 255 - -
Aev06g3418 297 MobiDBLite consensus disorder prediction 167 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g3418 Aev-Chr6 35313310 35314407 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g3418 1 287 AS2 family AT3G02550 58.333 6.41e-106 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Aev06g3418 LOB 1.5e-24 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g3418 06 35313310 35314407 Aev06g3418 06 35313310 35314407 ECH
Aev09g2629 09 27453594 27454427 Aev06g3418 06 35313310 35314407 ECH