Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1528 ATGGAAAACAAAAGAAGAAGAAAAGTGGTGTTGGAGGTTCTGAGCTTCATAGTGTGTAACAACAACAACAACAAAAATAACAACAACATCATCATCACCAACATCAACATCAACATGTCTGAGACTAAGAAGGATCCTGGTATCATACTATTTGGCAGAAAGATTCCATTGCCTGAATGTCAGATTCCAGCCAATTCTACAGCCAAGGATTCTTGTGGTAATAACTTAAAGAAAACAGAAGCAGCAGAAACACCATGTGCAGAAAACTCTAAGCAACAAGAGAAGAATTGTTCTGATTCAAGGGAGGGTCAACAAGAGTACTCCAAACACAATAATAATAATAATGTGAATGAAAATAATGATGCAAAAGCAAATTCCAAGCCTGTGGAAGATACTAACACTGAGACTAGTAGCAGCACTGATGATCAAGACAAAATCCTGAAGAAACCAGACAAGATTATTCAGTGTCCAAGATGCAACAGTTTTGACACAAAGTTCTGCTATTTCAACAACTATAATGTCAACCAGCCCCGGCATTTCTGCAAGAACTGCCAGAGGTATTGGACCGCCGGCGGAACGATGAGAAACGTCCCGGTTGGCGCCGGGAGGCGGAAGCATAAGCACCTAGCCTCACAATTCCGGCACATTATAGTATCCTCAAGACTAGAAGCCACAGATTCATCATCCTGTCACCACCCACAACATATCTCAGCTCCATTCATCAATTCCTCATCAACAGAAAATAATAATGGAACTGTGCTGAAATTTGGTCCAGACACTCCTCTCTGTGAATCAATGGAATCAATGCTTAATCTTAGAGACCAGAAAAGATGCATTGATACTGAAGGTTCTGTCAATTATGCAGAGGAATCAATATCATCAGTTACCAATGAATCATCAGAGCAACATAAAAACAGAACAAATTGGTTGAAATGTTATCCTGTTCCTCATTTGATGTTGCCATGGAATATGAATCCATATGGCACAAATGCTCCAAATAATCCAATTCAATGGTGTCCAACATCAATGGTTCCTCTGCAATTTGTTCCAGCACCATATTGGAATGGAACACCAATTTGGGGTTCTTCAAAAGTGTCAATAGGATCATCAAATCCATGCCTTTCACCTTGTTCATCCACCACTACTAGCAATAGTTGTTGCACAGATGGATCTCCAACTCTACTTGGAAAACACACTAGAGATGCATCATTTTATATTGGTGAAGACAAGTCAGAAAAGTTTGTTTATGAGGCCTCAAAAAGTCCTAATATTTGGACTTCATTTGCTATTATGCATCATGATAAGAAGAAGCATTGTGTGTCAAATGGTGCTGATATTTTGACAAAAACAGAATCTGAAGAAGCCAAAGATCAGAGTGTATTGGATGTGTCACAAATCATGGAAGCCAATCCAGCAGCTATTTCTCGTGTTCATGCATTTCAAGAGAGTACACAATGA 1458 0.393 MENKRRRKVVLEVLSFIVCNNNNNKNNNNIIITNININMSETKKDPGIILFGRKIPLPECQIPANSTAKDSCGNNLKKTEAAETPCAENSKQQEKNCSDSREGQQEYSKHNNNNNVNENNDAKANSKPVEDTNTETSSSTDDQDKILKKPDKIIQCPRCNSFDTKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKHKHLASQFRHIIVSSRLEATDSSSCHHPQHISAPFINSSSTENNNGTVLKFGPDTPLCESMESMLNLRDQKRCIDTEGSVNYAEESISSVTNESSEQHKNRTNWLKCYPVPHLMLPWNMNPYGTNAPNNPIQWCPTSMVPLQFVPAPYWNGTPIWGSSKVSIGSSNPCLSPCSSTTTSNSCCTDGSPTLLGKHTRDASFYIGEDKSEKFVYEASKSPNIWTSFAIMHHDKKKHCVSNGADILTKTESEEAKDQSVLDVSQIMEANPAAISRVHAFQESTQ* 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1528 485 ProSiteProfiles Zinc finger Dof-type profile. 154 208 IPR003851 GO:0003677|GO:0006355
Aev06g1528 485 ProSitePatterns Zinc finger Dof-type signature. 156 192 IPR003851 GO:0003677|GO:0006355
Aev06g1528 485 PANTHER CYCLIC DOF FACTOR 2 39 483 IPR045174 GO:0003700|GO:0006355
Aev06g1528 485 PANTHER CYCLIC DOF FACTOR 3-LIKE 39 483 - -
Aev06g1528 485 Pfam Dof domain, zinc finger 151 208 IPR003851 GO:0003677|GO:0006355
Aev06g1528 485 MobiDBLite consensus disorder prediction 107 140 - -
Aev06g1528 485 MobiDBLite consensus disorder prediction 83 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1528 Aev-Chr6 11045090 11047722 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1528 45 484 C2C2-Dof Transcription Factor Family AT5G39660 33.133 6.80e-58 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev06g1528 zf-Dof 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1528 - - gmx:100813787 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev06g1528 06 11045090 11047722 Aev06g1528 06 11045090 11047722 ECH