Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev06g1047 ATGGAAGGAATAGCTCCGAATAATTCATGCACAAACAGGGCGGCGCAGGTGTTGGAGAAGAAAGCAAGACCACAAGAGCAATTGAACTGTCCAAGGTGCAATTCAACCAACACGAAATTTTGTTACTACAACAACTACAGCCTCACTCAGCCCAGATACTTCTGCAAGACTTGCAGAAGGTACTGGACTGAGGGCGGGTCTTTAAGAAATGTCCCGGTTGGTGGCGGGTCTAGAAAGAACAAGAAGATCATCTCTACTTCATCATCAATTCCTTCAACCTCTCCAAAAGTTTCAGTACCAGACTTGAACCCACCAATAATTAACCCTAAAATGCAAGGAGGAGAAGGAGGCCATGATCTCAATTTGGCATTCCCATCTGTGGAGAATAATAACAGCAATACTAATAAGTATCATCATCATGGGATGTCCCAATACATTGAGATGGCGAAAATCGAAACCGGAAGCGATGGCCATTGTGGTTCATCAGCAGTTGAGATGCTGAGGTCTGGGATGGCTGCTGCTGCTGCTCCTAACTATGTTCATTCATTGATGCCAACTTCAAATAGTGCTCTTTTCCCAGCTGCTGCTGGGTTTCCGATCATGCAAGAGATTAAGCCAAACCTTGGATTATTCTCGATGGATCAAAACAGATCATCATCATCATATGGGGTTCATGAGAATAATAATAATGGGAGGCTTTTGTTCCCTTTTGGAGAAATGAAGCAGCTTTCTGCAGCAGCAGCTCATGTTGAAGATAAAGATCAAGGCAATTCAGCTGCTGGCTATTGGACTGGAATCATTGGTGAAGGATCATCATGGTAA 822 0.438 MEGIAPNNSCTNRAAQVLEKKARPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKIISTSSSIPSTSPKVSVPDLNPPIINPKMQGGEGGHDLNLAFPSVENNNSNTNKYHHHGMSQYIEMAKIETGSDGHCGSSAVEMLRSGMAAAAAPNYVHSLMPTSNSALFPAAAGFPIMQEIKPNLGLFSMDQNRSSSSYGVHENNNNGRLLFPFGEMKQLSAAAAHVEDKDQGNSAAGYWTGIIGEGSSW* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev06g1047 273 ProSiteProfiles Zinc finger Dof-type profile. 28 82 IPR003851 GO:0003677|GO:0006355
Aev06g1047 273 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 11 267 IPR045174 GO:0003700|GO:0006355
Aev06g1047 273 PANTHER DOF ZINC FINGER PROTEIN DOF3.7 11 267 - -
Aev06g1047 273 Pfam Dof domain, zinc finger 26 82 IPR003851 GO:0003677|GO:0006355
Aev06g1047 273 MobiDBLite consensus disorder prediction 73 101 - -
Aev06g1047 273 ProSitePatterns Zinc finger Dof-type signature. 30 66 IPR003851 GO:0003677|GO:0006355
Aev06g1047 273 MobiDBLite consensus disorder prediction 80 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev06g1047 Aev-Chr6 7046495 7047316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev06g1047 15 273 C2C2-Dof Transcription Factor Family AT3G61850 46.290 7.59e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev06g1047 zf-Dof 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev06g1047 - - gmx:100793115 267.7