Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3739 ATGTCGGAGCCAAAAGACCCGGCGATCAAGCTCTTCGGGAGGACGATCCCGGTTCTGGAGATTCCGGCCAGATCCGGAGACTCTGCCGGAGCTCAGGCGTCATCTTCCAGCGACGTTGCTGATGATGGTGCTGATCAGAATCGTGCTTGTTCTACCCATTCCTGCAACGCCAACAACAAAAGGGTTGGAGAAGAATGTGAGATTGACCAGGACACAGTGAGAGAGGAACTAACTGATGATAAGAAGTCAGACGGAGCCCCCATCCACGCATCTAATGAGGTCGCCAATCTAGACTCAGCCTCAAGAGATGAAGAATCTGTTGCCCCCTCTGCTGAGGAGGCTACTTCATTGAAAACTTCAAGGACTGAAGAACAGAGCGAGAATTCTCAAGAAAAGACGTTGAAAAAGCCTGACAAAATACTGCCTTGCCCCCGCTGTAATAGCATGGAAACCAAGTTCTGCTATTACAATAATTACAATGTCAACCAACCACGCCATTTCTGCAAGAATTGCCAGAGATACTGGACTGCTGGTGGAGCAATGAGGAATGTGCCTGTTGGTGCTGGTCGCCGAAAGAACAAGAACACTGCTTCTCATCATCGTCAGATGACTGTCAATGAAGCAGCACTCCCGAATCCCCTGCCAGATTTGCAGAATGGAATTCAACATCCTGCCTTGAATTGTAATGGTGCAGTCCTTAAATTTGGGACTGATACACGCTTGTGTGAATCAATGACATCAGTTTTGAACCTTGTTGATAAAACAGTGAACAATGATACAAGAAGTGGATTTAATAGACCAGAAGAACTAAGAACTCCTGCTCCATGTGCTGGTGTAGAAAAGGGGAATGATCATCCTGATAAATCTTCTGTCATGTCAACACAGCCGACGGAAGGTGCAACCATCAATAAGTCCCAAGAACAAATTGTGCAGAGTTCTTATCAAAGTTTCCCACCTCAAGTTCCCTACTTTCCTGGAGCCCCTTGGCCTTTCCCATGGAATCCAGCTCAGTGGAGCTCTCCAGTACCACCAGCTCCCTTTTTCCCACCAGGATATACCGTGCCTTTCTATCCTGCACCAGCTTATTGGGGTTGTACTCTGCCAGGTGCGTGGAGCATCCCATGGATAGCGCAACCATCTTCACCTCGTAGTTCTGCCTCTAACTCTGGCCCTAACTCCCCAACCTTGGGTAAACATTCAAGGGAAGAAAACTCGGTCAAATCAAATGATGTTGTAGGTGGGGATGAACACAGCAAAGAAACCAATAAAGAAAAGAACCTTTGGGTTCCGAAAACATTGAGGATTGATGATCTAGGGGAAGCAGCGAAAAGCTCTATATGGACAACTCTAGGGATTAAAAGTAATGAGGCAGACTCAATTCAAGGGGAAGGAATCTTCAAAGCATTCACATCAAAGGTTGATGCAAAAGACCATGTAGTGCCAAACTCACAAGTCTTGCAGGTCAATCCAGCAGCATTGTCTAGGTCGATCAACTTTCACGAGACCTCGTAA 1512 0.4676 MSEPKDPAIKLFGRTIPVLEIPARSGDSAGAQASSSSDVADDGADQNRACSTHSCNANNKRVGEECEIDQDTVREELTDDKKSDGAPIHASNEVANLDSASRDEESVAPSAEEATSLKTSRTEEQSENSQEKTLKKPDKILPCPRCNSMETKFCYYNNYNVNQPRHFCKNCQRYWTAGGAMRNVPVGAGRRKNKNTASHHRQMTVNEAALPNPLPDLQNGIQHPALNCNGAVLKFGTDTRLCESMTSVLNLVDKTVNNDTRSGFNRPEELRTPAPCAGVEKGNDHPDKSSVMSTQPTEGATINKSQEQIVQSSYQSFPPQVPYFPGAPWPFPWNPAQWSSPVPPAPFFPPGYTVPFYPAPAYWGCTLPGAWSIPWIAQPSSPRSSASNSGPNSPTLGKHSREENSVKSNDVVGGDEHSKETNKEKNLWVPKTLRIDDLGEAAKSSIWTTLGIKSNEADSIQGEGIFKAFTSKVDAKDHVVPNSQVLQVNPAALSRSINFHETS* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3739 503 MobiDBLite consensus disorder prediction 28 59 - -
Aev05g3739 503 MobiDBLite consensus disorder prediction 379 425 - -
Aev05g3739 503 MobiDBLite consensus disorder prediction 260 295 - -
Aev05g3739 503 Pfam Dof domain, zinc finger 138 195 IPR003851 GO:0003677|GO:0006355
Aev05g3739 503 MobiDBLite consensus disorder prediction 117 139 - -
Aev05g3739 503 MobiDBLite consensus disorder prediction 400 425 - -
Aev05g3739 503 ProSitePatterns Zinc finger Dof-type signature. 143 179 IPR003851 GO:0003677|GO:0006355
Aev05g3739 503 MobiDBLite consensus disorder prediction 21 140 - -
Aev05g3739 503 MobiDBLite consensus disorder prediction 60 87 - -
Aev05g3739 503 ProSiteProfiles Zinc finger Dof-type profile. 141 195 IPR003851 GO:0003677|GO:0006355
Aev05g3739 503 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN 1 502 - -
Aev05g3739 503 PANTHER CYCLIC DOF FACTOR 2 1 502 IPR045174 GO:0003700|GO:0006355
Aev05g3739 503 MobiDBLite consensus disorder prediction 379 399 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3739 Aev-Chr5 36072657 36075183 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3739 6 503 C2C2-Dof Transcription Factor Family AT5G39660 42.065 4.14e-107 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev05g3739 zf-Dof 6.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3739 - - gmx:100788247 654.055