Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g3296 ATGGACAAGTGCTGGATTCTGGCTTTTCTAGTCCTCACCCTTCATTTAACTGCAACAGTAGCTGCATTTGATGTTGGTGGTGGTGTAGGTGTAGGTGTTGGTGTTGGAAACGGTGGTGGCGGTGGTGGAATGGTTTGGGTTGGTGGAGGGATTAACAGCAACCCTCAACCCTCTGGATCTTCATCAGTGTCAAAGCTTGATGGTGCTTACACAGCTCTGCAGGCATGGAAATCTGCAATCACAGATGACCCTATGAAGATTTTGGACACTTGGGTTGGTCCAAATGTGTGTTCTTACAAAGGGGTGTTCTGTTCAAATACTCAAGATGAAATGGGTGGTTCAGCATTTCCTGTTGTTGCAGGCATAGATCTTAACCATGCAAATCTCCAAGGAACTCTTGTCAAAGAGCTATCTTTGCTCAGTGACATGTCTCTTCTCCACCTCAACAGTAACAGGTTTTCTGGCACTGTTCCTGATACATTCAGAGACCTAATCTCTGTGGAAGAGTTGGACCTCAGCAACAACCAGCTCTCAGGTCCTTTCCCTGCTGTTACTTTGTACATGCCAAGCCTCATCTACTTGGACCTCAGATTCAACTACTTCTCAGGGTCACTCCCTCAGGAACTTTTCAACAAGGATCTGGATGCATTGTTCCTCAACAACAATCAATTTGAAGGAGAAATTCCTCAGAACCTTGGGAATTCCCCTGCATCAGTGATAAATTTGGCCAACAACAAGTTAAGTGGAAACATCCCAGCAAGTTTTGGCTTCATGGGTTCTAAGCTGAAGGAGATTCTCTTCCTCAATAACCAGCTAACAGGTTGCATACCAGAAGGGGTAGGGCTATTCACAGAGATGCAAGTTTTGGATGTGAGCTTCAATTCACTAATGGGCCATTTGCCAGACACAATATCTTGCCTGCAATACATTGAAGTACTTAATTTGGCACATAACAAGCTTTCTGGGGAGTTATCAGATATAATCTGCTCTCTGAGAAGCCTAGCAAATCTTACAGTTGCTTACAATTTCTTTTCTGGGTTCAGCCAGCAATGCTCAAAGCTTTTCTTTAGGAATGTGGGTTTTGATTTCTCACTTAACTGCATTCCTGGCAGGGACATGCAGAGACCTCAACCTGAGTGCTCTGTGATCCCAGGTGGTAGCCTAAGTTGTATCAGAATCCCAACACCAAAGCCTCTTGTTTGTGGTTCACTGGCTGTAAGTGCCTCTAAGCACACTGATTCCAGTTCACCATCATCATCTCCTTGA 1266 0.4471 MDKCWILAFLVLTLHLTATVAAFDVGGGVGVGVGVGNGGGGGGMVWVGGGINSNPQPSGSSSVSKLDGAYTALQAWKSAITDDPMKILDTWVGPNVCSYKGVFCSNTQDEMGGSAFPVVAGIDLNHANLQGTLVKELSLLSDMSLLHLNSNRFSGTVPDTFRDLISVEELDLSNNQLSGPFPAVTLYMPSLIYLDLRFNYFSGSLPQELFNKDLDALFLNNNQFEGEIPQNLGNSPASVINLANNKLSGNIPASFGFMGSKLKEILFLNNQLTGCIPEGVGLFTEMQVLDVSFNSLMGHLPDTISCLQYIEVLNLAHNKLSGELSDIICSLRSLANLTVAYNFFSGFSQQCSKLFFRNVGFDFSLNCIPGRDMQRPQPECSVIPGGSLSCIRIPTPKPLVCGSLAVSASKHTDSSSPSSSP* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g3296 421 PANTHER LRR/EXTENSIN 1 418 - -
Aev05g3296 421 PRINTS Leucine-rich repeat signature 167 180 - -
Aev05g3296 421 PRINTS Leucine-rich repeat signature 307 320 - -
Aev05g3296 421 SUPERFAMILY L domain-like 70 353 - -
Aev05g3296 421 Pfam Leucine rich repeat N-terminal domain 70 105 IPR013210 -
Aev05g3296 421 Gene3D Ribonuclease Inhibitor 237 358 IPR032675 -
Aev05g3296 421 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 1 418 - -
Aev05g3296 421 Gene3D Ribonuclease Inhibitor 69 236 IPR032675 -
Aev05g3296 421 Pfam Leucine rich repeat 145 200 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g3296 Aev-Chr5 32658912 32660177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g3296 50 392 Leucine-rich Repeat extension Gene Families AT3G24480 48.424 1.47e-104 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g3296 - - gmx:100775544 644.039
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g3296 05 32658912 32660177 Aev05g3296 05 32658912 32660177 ECH