Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0681 ATGAACACGGCTGTTACCAGAAAGGACATGGATCGGATCAAGGGCCCATGGAGCCCGGAAGAGGACGAGGCTCTTCAGAGGCTGGTGGAGAAGCACGGCCCCAGGAACTGGTCCCTCATCAGCAAATCCATCCCGGGCCGCTCCGGCAAGTCCTGCAGGCTCCGATGGTGCAACCAGCTGTCACCGCAGGTTGAGCACCGGGCCTTCACGGCCGAAGAGGACGACACCATCATCAGAGCCCACGCCCGCTTCGGAAACAAGTGGGCCACCATAGCCCGCCTCCTCTCGGGCCGAACCGACAACGCCATCAAGAACCACTGGAACTCAACCCTCAAGCGCAAGTGCGCTTCGATGTCGATCGACGAGCCACTCATGGCGCAGCCCCTCAAGCGATCCGTTAGCGCCGGCGCCGCCGTACCCGTATCCACTGGGCTCTACATGAACCCTCCCACACCGGGTAGCCCCTCCGGATCCGATGTGAGTGAGTCTAGCGTACCCCTTGCTTCCACCTCACACGTTTACAGACCCGTGGCGAGGACCGGCGGGGTTCTACCACCCGTAGAAACGACGTCGTCTTCCAATGACCCTCCTACCTCATTGTCGCTGTCCCTCCCTGGCGTGGACTCTTCAGAAGTCTCGAATCGGGTTGCCGAGACGATTCAGGCTGCGTTACCATTGAATGCTATACCTCTGATGCCGGTAATGGCAACGGCGGCACCAGTTGCGGCTCCGATTACTGTGCAGCCGCTGCAGCAGGTTCACGATCCGTCGGCGGCGAAACAGAAAGCGGTGCCTCCGCAGGCGGCGGGGGTGCCGTTTAACTTCAGCGCGGAGTTGTTGGCGGTGATGCAGGAGATGATAAGGACGGAGGTGAGGAGTTATATGGCAGGGTTGGAGCAGCAGCAGAGTAATGGGATGTGTTTTCAGGCGGCTGATGATGGGTTTAGGAATGCTTCCGTGAAGCGTATTGGTATTAGCAGGATCGATTAG 990 0.596 MNTAVTRKDMDRIKGPWSPEEDEALQRLVEKHGPRNWSLISKSIPGRSGKSCRLRWCNQLSPQVEHRAFTAEEDDTIIRAHARFGNKWATIARLLSGRTDNAIKNHWNSTLKRKCASMSIDEPLMAQPLKRSVSAGAAVPVSTGLYMNPPTPGSPSGSDVSESSVPLASTSHVYRPVARTGGVLPPVETTSSSNDPPTSLSLSLPGVDSSEVSNRVAETIQAALPLNAIPLMPVMATAAPVAAPITVQPLQQVHDPSAAKQKAVPPQAAGVPFNFSAELLAVMQEMIRTEVRSYMAGLEQQQSNGMCFQAADDGFRNASVKRIGISRID* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0681 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 64 IPR017930 -
Aev05g0681 329 MobiDBLite consensus disorder prediction 185 206 - -
Aev05g0681 329 MobiDBLite consensus disorder prediction 147 170 - -
Aev05g0681 329 Gene3D - 13 65 - -
Aev05g0681 329 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Aev05g0681 329 CDD SANT 68 111 IPR001005 -
Aev05g0681 329 Pfam Myb-like DNA-binding domain 14 60 IPR001005 -
Aev05g0681 329 Pfam Myb-like DNA-binding domain 68 110 IPR001005 -
Aev05g0681 329 ProSiteProfiles Myb-like domain profile. 9 60 IPR001005 -
Aev05g0681 329 PANTHER MYB PROTEIN-RELATED 4 297 - -
Aev05g0681 329 Gene3D - 67 134 - -
Aev05g0681 329 MobiDBLite consensus disorder prediction 146 206 - -
Aev05g0681 329 PANTHER TRANSCRIPTION FACTOR MYB44-LIKE 4 297 - -
Aev05g0681 329 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 115 IPR017930 -
Aev05g0681 329 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Aev05g0681 329 SMART sant 65 113 IPR001005 -
Aev05g0681 329 SMART sant 13 62 IPR001005 -
Aev05g0681 329 CDD SANT 16 58 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0681 Aev-Chr5 4738490 4739479 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0681 6 329 MYB Transcription Factor Family AT4G37260 52.874 4.72e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Aev05g0681 Myb_DNA-binding 2e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0681 05 4738490 4739479 Aev01g0533 01 4779138 4780049 ECH
Aev07g0886 07 6166237 6166881 Aev05g0681 05 4738490 4739479 ECH
Aev05g0681 05 4738490 4739479 Aev05g0681 05 4738490 4739479 ECH
Aev01g0533 01 4779138 4780049 Aev05g0681 05 4738490 4739479 PCT