Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0605 ATGATCCAAGAACTGTTTGCTGGTTCCAACCTCATAGCAGGAGAAAGGAAAATCTCCATTAACTCCCCATCGTCCTCCTCCTCATCACTTCTACTCCCACCAACCACTTCTTCTTCTACCACCACCACCACTCCAGCAAATAATTCTTCATCATCAGATCAGAACCAGAACCACAACCAGAACCTGAGGTGCCCCAGATGCGATTCCTCCAACACCAAGTTCTGCTACTACAACAACTACAACCTAACTCAGCCCCGCCACTTCTGCAAGACCTGCCGCCGCTACTGGACCAAGGGTGGCGCTCTCAGGAACGTCCCCATCGGTGGCGGCTGCCGCAAGAACAAGACCGTAGGAATGTCCTCAGCCTCCTCCGCAGCTAATAAGGCCACCACGGTTACCAAGATGAAAGCCGTGGTGGCCTCCGAGCTTGGAAGGCCAGGACTTGTTGCCTCCGGGTTCGATCACGACCTTCAAGTTCAACCTAGCCCCATCCTATGGGGCTCACCACAAAATACTCATCTACTCGCTTTACTCAGAGCTACCCAGAATCAAAACCCTAACCCTAACTCTAACCCCGGTTCGATGTCGGTTAAGGAAGAAGGGAACTTGATGGGCAGCAATAATCATCAGTCCCACATGGTGGCTGAGCCTTTGATTGCAAATGGGTTGATGAATATCCCTAGATCAACCCTAGGGTATGATGGTGGTGTAGGACAAGTAGTTCCTTCACTGGGTCTATGCACCAGTTCTTTGTGGAGAAACAATAACAACACTCATCATCAAGATCAAAATAGTGGAGGATTTGTACTTGGGGAAAATCATCAAAGCAGTGGAATTCAAGAGCTTTACCACAAGATCAGGGCTAATAATAGTAATTATTGCAATGAAAACTCATCATCATCATCACCAATAATGTTTATGGGAAACATGGCATCCTCGTCATCACCATCTTCTTCTTCTTTGTCAACAATTTTGGAGTCATCTTCAGTTGTTGGTGGGGCTGAATTAATGGGGTGCTGGAATCCAACTCTTCCGTGGTCTGATCTTCCTACAACAACCACCAGTGGTGCATATCCTTAA 1080 0.4769 MIQELFAGSNLIAGERKISINSPSSSSSSLLLPPTTSSSTTTTTPANNSSSSDQNQNHNQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKTVGMSSASSAANKATTVTKMKAVVASELGRPGLVASGFDHDLQVQPSPILWGSPQNTHLLALLRATQNQNPNPNSNPGSMSVKEEGNLMGSNNHQSHMVAEPLIANGLMNIPRSTLGYDGGVGQVVPSLGLCTSSLWRNNNNTHHQDQNSGGFVLGENHQSSGIQELYHKIRANNSNYCNENSSSSSPIMFMGNMASSSSPSSSSLSTILESSSVVGGAELMGCWNPTLPWSDLPTTTTSGAYP* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0605 359 ProSiteProfiles Zinc finger Dof-type profile. 62 116 IPR003851 GO:0003677|GO:0006355
Aev05g0605 359 MobiDBLite consensus disorder prediction 21 61 - -
Aev05g0605 359 Pfam Dof domain, zinc finger 60 116 IPR003851 GO:0003677|GO:0006355
Aev05g0605 359 ProSitePatterns Zinc finger Dof-type signature. 64 100 IPR003851 GO:0003677|GO:0006355
Aev05g0605 359 PANTHER DOF ZINC FINGER PROTEIN DOF5.1-LIKE 20 354 - -
Aev05g0605 359 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 354 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0605 Aev-Chr5 4176679 4177758 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0605 57 131 C2C2-Dof Transcription Factor Family AT5G60850 71.795 2.94e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev05g0605 zf-Dof 2.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0605 - - gmx:778100 350.132