Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0599 ATGCCGTCGTCGGAGTCCAGCGATAGCCGCCGACCATCCAAGCCTCAGAACACTGCGGGGGCTGCGCCGCCGCCGGAGCAAGAGCACCTTCCCTGCCCTCGCTGCGACTCAACCAACACCAAGTTCTGCTACTACAACAACTACAACTTCTCACAGCCCCGCCACTTCTGCAAGTCCTGCCGCCGCTACTGGACCCACGGCGGCACCCTCCGCGATATCCCCGTCGGCGGAGGAAGCCGCAAGAACGCCAAGCGCTCCCGTACTGTCTCCGCCCCTTCTTCCTCTTCTACTTCCTCCGCCGCCGTGACCTCCGCCTCTTCTGCCACCCCGGTGATGCTGCCCGCCGTCCCCGGCAACCATGGAGTAGGGTCCATGCAGTTTAACGGTGGAGTTGTTGTTGATGGTGGCATTAAGGGTAATAGCGTCAATGTGTGCGGTGGAAATGGGAGCTTCACTTCTCTGCTTAGCAATACCCAAGCGCCTGGCGGGTTTCTTGCTCTTGGTGGGTTTGGGCTTGGGCCTGCTCTTGGGCTTGGGCCTACGCTTGACGATGTGGAGTTTGGGATGGGTAGAGCTGCTGCTGGTTGGGCTTTCCCGGGAATGGCGGATGGAGGTAACAACATTGTTGGCGGCGGGGGCGGCGTTGTTGGCGGTTCCGGTGTTGGGAACACGTGGCAGTTTGAAAACGGTGATAGTGGGTTTGTTGGTGGAGAATGCTTCTCTTGGCCTGGACTAGCGATTTCAACACCAGGAAATGGTCTCAAATGA 768 0.5938 MPSSESSDSRRPSKPQNTAGAAPPPEQEHLPCPRCDSTNTKFCYYNNYNFSQPRHFCKSCRRYWTHGGTLRDIPVGGGSRKNAKRSRTVSAPSSSSTSSAAVTSASSATPVMLPAVPGNHGVGSMQFNGGVVVDGGIKGNSVNVCGGNGSFTSLLSNTQAPGGFLALGGFGLGPALGLGPTLDDVEFGMGRAAAGWAFPGMADGGNNIVGGGGGVVGGSGVGNTWQFENGDSGFVGGECFSWPGLAISTPGNGLK* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0599 255 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Aev05g0599 255 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 1 252 IPR045174 GO:0003700|GO:0006355
Aev05g0599 255 MobiDBLite consensus disorder prediction 1 32 - -
Aev05g0599 255 MobiDBLite consensus disorder prediction 1 16 - -
Aev05g0599 255 MobiDBLite consensus disorder prediction 83 104 - -
Aev05g0599 255 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Aev05g0599 255 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Aev05g0599 255 PANTHER DOF ZINC FINGER PROTEIN DOF3.4 1 252 - -
Aev05g0599 255 MobiDBLite consensus disorder prediction 71 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0599 Aev-Chr5 4141758 4142525 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0599 1 255 C2C2-Dof Transcription Factor Family AT3G50410 48.302 1.38e-62 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev05g0599 zf-Dof 3.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0599 - - qsu:112038043 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev05g0599 05 4141758 4142525 Aev05g0599 05 4141758 4142525 ECH