Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev05g0089 ATGATGGATGAAACATCTGCAAAAAAACCGAAGGAGCATGAGAACCAACAAGGTGGCTGTGGTGGCGGTAGCAGCAAGAAAAGTGGCTCATCCACAGCAACAACAAGGGCACAGCAGGCAGAGCAAGGATTGAAGTGCCCAAGATGTGACTCGCCAAACACAAAATTCTGCTACTACAACAACTACAGCCTCACACAGCCAAGGCACTTCTGCAAGACCTGCAGAAGGTACTGGACAAAAGGTGGAGCCCTGAGGAATGTTCCAATCGGCGGTGGGTGCAGGAAGAACAAGAAAGTTAAATCCTCAAGGCTCTCATCATCATCATGCGATTCAAGGGACTCTGCCTCTTCCTCAGAGCTCGGTGGCCTCAGGTTCCTTCACGGTCTTGCTTCTTCTTCACTACCTTCTCTTGATTTCCACCTTGCTGGTGCTGGATTTCCCTTCCCTACTAGGCTCCACCATCCAAACTTGTTCAGCAACCAGTTCCCTGCTGCTGCAGCTGCTTTTGGGGACTTATCAGCAAACTCTGCTTCTTGCAACAATTCCTCCTGTTTCAACCAGCAGCTCGACCCTAATAATTTTTCCTTGATTGGACTCAATTACCCTTTTTCTGCTAACTCTTCCTCATCAGGGTTCACCGGTGCAAACAATGCAATCATGGGAATGAGCTCAATGAACATTAACAGCAACATTGCTTCTTCTATTGAGTCACTGAGTTCGATGAATCAGGACTTGCACTGGAAGCTGCAGCAGCAAAGGTTGGCCATGCTGTTTGGTGGAGGAGGAGGAGGAGACAACAATAGTAGTAACCACCACCAGAAAGATGATGACCACCATCATCATCATCAAGTGGTTGGAGTGGTTGAGAAACCACAGCCCATTTTGTTTCAGAACCTTGAGGGTTCAAAGGCAGAGATGTTCAACCCGTCAAGAAAAGAAGGAGCTAGTAGTGGTGGGGACAACAACAGCACAGCAACAGTTACCCCTACAGAGTGGTTCTTTGGGAATAATAATAATTCTAGTTCTAGTTATGCCGCCTCAGTGGCTGCTCCTACACCAGCTAGCAACAGTGGTGGTGGACATGATAATGCAGCTGCAACAATCAACTGGGGTGGTGGTGTCCATGCTACTTGGGGTGATGTGCAGCACCAATACACTGCTCTGCCCTAG 1170 0.4829 MMDETSAKKPKEHENQQGGCGGGSSKKSGSSTATTRAQQAEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSRLSSSSCDSRDSASSSELGGLRFLHGLASSSLPSLDFHLAGAGFPFPTRLHHPNLFSNQFPAAAAAFGDLSANSASCNNSSCFNQQLDPNNFSLIGLNYPFSANSSSSGFTGANNAIMGMSSMNINSNIASSIESLSSMNQDLHWKLQQQRLAMLFGGGGGGDNNSSNHHQKDDDHHHHHQVVGVVEKPQPILFQNLEGSKAEMFNPSRKEGASSGGDNNSTATVTPTEWFFGNNNNSSSSYAASVAAPTPASNSGGGHDNAAATINWGGGVHATWGDVQHQYTALP* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev05g0089 389 MobiDBLite consensus disorder prediction 302 332 - -
Aev05g0089 389 MobiDBLite consensus disorder prediction 258 282 - -
Aev05g0089 389 Pfam Dof domain, zinc finger 42 98 IPR003851 GO:0003677|GO:0006355
Aev05g0089 389 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 389 IPR045174 GO:0003700|GO:0006355
Aev05g0089 389 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
Aev05g0089 389 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Aev05g0089 389 PANTHER DOF-TYPE ZINC FINGER DNA-BINDING FAMILY PROTEIN-RELATED 20 389 - -
Aev05g0089 389 MobiDBLite consensus disorder prediction 314 332 - -
Aev05g0089 389 MobiDBLite consensus disorder prediction 1 36 - -
Aev05g0089 389 MobiDBLite consensus disorder prediction 1 15 - -
Aev05g0089 389 MobiDBLite consensus disorder prediction 18 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev05g0089 Aev-Chr5 699671 700840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev05g0089 21 389 C2C2-Dof Transcription Factor Family AT5G65590 39.623 2.16e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev05g0089 zf-Dof 1.6e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev05g0089 - - gmx:100780729 290.426