Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3386 ATGATGATGGCGAGTAGTGTAGAAGGGCAAGAAAGAGATGATGAGGAATTAGTACTAGTTAAGAGTAGTAGTAATAATTATTCATCAAAGTGTGAAGATTGTGGGAACCAAGCGAAGAAGGATTGTGGATACTCAAGATGCAGAACTTGTTGCAAGAATAAGGGGTTTCAGTGCCAAACCCACATCAGAAGCACTTGGATCCCTGTTGATAGAAGGCGCCAGCGATCACCACTCATGGTCATGGATCCATCATCTCATCCCACTACTACTTATTCTAATCATCACCACCTTCTTCAAGGAGATGATCATAATAATGATATCATCCATAATATTATCCCTAAAAGGCACAAGCACAACCCATTTTCAGAGGAGATGGAGTTTCCAGCAGCAATGAGTTCGGTGGCAATATTCAGCTGTGTTCGGGTGCGGTCAATGGATGATTCGGTCAATGAAATTGCCTATCAAACATCTGTGAATATTGGAGGACACATATTTAGTGGTCTTCTCTATGATCAAGGCCCTGCAGATAATAATAATAATAATAATGAACAACAAAAAAGCTTCAATAATAATAATAATAATAATCATAGGCATAGATCAGGTGAAGGCTCCAAAACACACACTCCTCCTCTTGTTCATCATCATCAACAACAACACAATCTGAATCTTATGATGATGAGTACTTCTGATGCAATCCATGTTCGTCATAATGATGCTGCAACTTTCTCTTCACTGCCTCCACCTACCACTACTGCTCATGAACAATTTTTTCCTTTACCTAATTCCTTTAGGTCTGGCATGCAATATTTTTAG 813 0.3911 MMMASSVEGQERDDEELVLVKSSSNNYSSKCEDCGNQAKKDCGYSRCRTCCKNKGFQCQTHIRSTWIPVDRRRQRSPLMVMDPSSHPTTTYSNHHHLLQGDDHNNDIIHNIIPKRHKHNPFSEEMEFPAAMSSVAIFSCVRVRSMDDSVNEIAYQTSVNIGGHIFSGLLYDQGPADNNNNNNEQQKSFNNNNNNNHRHRSGEGSKTHTPPLVHHHQQQHNLNLMMMSTSDAIHVRHNDAATFSSLPPPTTTAHEQFFPLPNSFRSGMQYF* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3386 270 PANTHER BNAC01G23660D PROTEIN 22 210 - -
Aev04g3386 270 MobiDBLite consensus disorder prediction 173 197 - -
Aev04g3386 270 Pfam Domain of unknown function (DUF702) 29 175 - -
Aev04g3386 270 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 22 210 IPR007818 GO:0003700|GO:0006355
Aev04g3386 270 MobiDBLite consensus disorder prediction 173 216 - -
Aev04g3386 270 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 127 174 IPR006511 -
Aev04g3386 270 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 30 72 IPR006510 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3386 Aev-Chr4 32579346 32580850 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Aev04g3386 DUF702 1.2e-49 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3386 04 32579346 32580850 Aev04g3386 04 32579346 32580850 ECH
Aev08g0231 08 1313294 1315097 Aev04g3386 04 32579346 32580850 ECH
Aev07g0717 07 4666597 4668471 Aev04g3386 04 32579346 32580850 ECH
Aev04g3386 04 32579346 32580850 Aev08g0231 08 1313294 1315097 ECH