Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3375 ATGGCTTCCTCAAGTGGAACATCTTCAGGTTCATCTGTGCTTCAGAACTCTGGGTCTGAGGAGGACTTGCAGGCTCTGATGGATCAGAGGAAGAGGAAAAGAATGATATCAAACCGTGAATCTGCAAGGAGGTCAAGGATGAGGAAGCAGAAGCACCTTGATGATCTTGTTTCTCAGGTTTCTCAGCTGAGGAAGGAGAATCAGCAGATTCTCACAAGTGTTAACATCACAACACAGAATTACCTGAGTGTTGAGGCAGAGAACTCTGTTCTGAGGGCACAGGTTGAGGAGCTTAGCAGAAGATTGGACTCACTGAATGAGATCATTGATTTCTTGAATGCAAACAACTCTGGTCATCTTTTTGGTTCATCATCATTCATTGAACCATCAATCAATAACAGTAACAACAGCTTCTTCAACCCTTTGAATATGGCATATCTTAATCAGCCTATTATGGCCTCACCAGACATGTTGCAATACTGA 483 0.4286 MASSSGTSSGSSVLQNSGSEEDLQALMDQRKRKRMISNRESARRSRMRKQKHLDDLVSQVSQLRKENQQILTSVNITTQNYLSVEAENSVLRAQVEELSRRLDSLNEIIDFLNANNSGHLFGSSSFIEPSINNSNNSFFNPLNMAYLNQPIMASPDMLQY* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3375 160 PANTHER BZIP TRANSCRIPTION FACTOR 44 1 158 - -
Aev04g3375 160 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Aev04g3375 160 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Aev04g3375 160 MobiDBLite consensus disorder prediction 1 23 - -
Aev04g3375 160 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Aev04g3375 160 MobiDBLite consensus disorder prediction 1 51 - -
Aev04g3375 160 PANTHER BZIP TRANSCRIPTION FACTOR 1 158 - -
Aev04g3375 160 MobiDBLite consensus disorder prediction 24 51 - -
Aev04g3375 160 Coils Coil 81 115 - -
Aev04g3375 160 Gene3D - 28 83 - -
Aev04g3375 160 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Aev04g3375 160 Coils Coil 46 66 - -
Aev04g3375 160 Pfam bZIP transcription factor 30 75 IPR004827 GO:0003700|GO:0006355
Aev04g3375 160 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3375 Aev-Chr4 32499763 32500245 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aev04g3375 bZIP_1 3.6e-10 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3375 04 32499763 32500245 Aev04g3375 04 32499763 32500245 ECH
Aev04g3375 04 32499763 32500245 Aev08g0252 08 1419580 1420083 ECH