Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3129 ATGGTTTACTCTTCTATTCCAGTCTATGTAGATCCTCCCAATTGGCAGCAGCAACCGAATCTTCATCATCAGACAAATGGAAGTGACAATAATACGCAGCTACTTCCACCGCTTCCCCCTCTGGCAGGGCAGCCTCCTTTGGGGGGAGCTGGTATGGGCTCAATCAGGCCAGGCTCGATGGCTGATCGAGCCCGACTAGCTAAAATACCACCACCAGAGACTGCCCTTAAGTGCCCTCGTTGTGAATCCACCAACACGAAATTCTGCTACTTCAACAACTACAGCCTCTCCCAGCCCCGCCACTTCTGCAAGACGTGTAGGCGTTACTGGACAAGGGGTGGCGCCCTAAGGAACGTTCCGGTAGGCGGAGGGTGCCGCCGGAACAAGAAGAACAAGAGGAGCCGGTCCAAATCACCAGCCTCAAACACGACCGAAAAGCAACAACCACTCACAAATTCCTTATCATCATCGTCACCAAGTGCAATAATCCCTAATAACCATCCAAGTGGTGGCAGCACTCATGAACTTATAGGTTTACCTCACCAGCCACCAAACTTACCCTTCATGGCCTCTCTCCATCAGAATCTAAACAACCACCGGTATGGTGTTGTTGGAAACATTGGCCTAAGCTTGCGTGAGATCCAAGGACAAACAGGTCAACATCATCACATGGGGTTTCAAATTGGTCTTGCAAATAATTCTGATCCTGCTCATCATAATCAATGGAGGTTGCAACAATTTCCTTTCTTGAATGGTTTTGAGTCCAGCTCAAATTCAACTGCTGCAGCAGCTTCATACCCTTTTCAAAATGAAGGTATCAATAGTAATAATGATGTTAATGAAGCACCTTCTTGTTTGGTTGGAGATATAGCTGCTTTGGGTTCTAGGGTTACTGCTAATACTCATCAGATGCAGCCACTATCACCGGTTAAGATGGAAGAAAATGGGGCTATGAATAATCTGTCAAGGTCACATCTCAACAACAATAACAATAACAATAACAATGTCTCGGAAAATAACCAATACTATTCATGGACTGATATGTCAGGTCTTGCTTCTTCTTCCACTACTCATCTTTTGTAA 1083 0.458 MVYSSIPVYVDPPNWQQQPNLHHQTNGSDNNTQLLPPLPPLAGQPPLGGAGMGSIRPGSMADRARLAKIPPPETALKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKKNKRSRSKSPASNTTEKQQPLTNSLSSSSPSAIIPNNHPSGGSTHELIGLPHQPPNLPFMASLHQNLNNHRYGVVGNIGLSLREIQGQTGQHHHMGFQIGLANNSDPAHHNQWRLQQFPFLNGFESSSNSTAAAASYPFQNEGINSNNDVNEAPSCLVGDIAALGSRVTANTHQMQPLSPVKMEENGAMNNLSRSHLNNNNNNNNNVSENNQYYSWTDMSGLASSSTTHLL* 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3129 360 ProSiteProfiles Zinc finger Dof-type profile. 76 130 IPR003851 GO:0003677|GO:0006355
Aev04g3129 360 MobiDBLite consensus disorder prediction 137 172 - -
Aev04g3129 360 PANTHER DOF DOMAIN ZINC FINGER PROTEIN 5 357 - -
Aev04g3129 360 ProSitePatterns Zinc finger Dof-type signature. 78 114 IPR003851 GO:0003677|GO:0006355
Aev04g3129 360 Pfam Dof domain, zinc finger 75 130 IPR003851 GO:0003677|GO:0006355
Aev04g3129 360 MobiDBLite consensus disorder prediction 14 58 - -
Aev04g3129 360 MobiDBLite consensus disorder prediction 14 37 - -
Aev04g3129 360 MobiDBLite consensus disorder prediction 117 182 - -
Aev04g3129 360 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 357 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3129 Aev-Chr4 30926066 30927391 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3129 1 132 C2C2-Dof Transcription Factor Family AT2G37590 61.379 1.86e-49 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g3129 zf-Dof 3.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3129 - - gmx:100816635 368.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3129 04 30926066 30927391 Aev04g3129 04 30926066 30927391 ECH
Aev10g1822 10 19994250 19995366 Aev04g3129 04 30926066 30927391 PCT