Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g3047 ATGGATCCTTCAACTGCACACCAGCAAATAATGTCAGAGCAATCACTTGAAAGCATGTTGGTTTGTTCAAAAGCACAACAAGAACAAGAAGATCAGAATAAGAAGGCAATAAGGCCACAACCAGAACAAGCACTAAAATGTCCAAGATGTGACTCAACAAACACCAAATTCTGTTACTACAACAACTATAGCCTCTCACAGCCTAGGTATTTCTGCAAGTCCTGCAGAAGGTACTGGACTAAAGGTGGAACTCTAAGGAATGTTCCTGTGGGTGGAGGGTGCAGGAAGAACAAAAGATCCTCCTCCTCATCATCAAAAAGGGGTGGTCAAGATCAACCCTTTCTCAACACAAATCCTCATCAAAATATGAATAATCCATTATTATTCTCTGGCTTCCCTACTCAATTGTCCTGCTTTGACTCATCAAATGATTTTGCTCTTGCAATTGCTGCTAGGCTCCAAAAAGGGCATCATCAACAACAACAACTTGGATTTGATGACCACCATGATCTTTCAATTTTGGGGAGCACCATAGGCGGCTCCACTACCCCTAATTGTGACATCCTAGGATTGAACAACTCTGCTACAGCAACCACCACAGGGACAGGGTTCTTGGATGCACTTAGAAGTGGATTCCTAGGAACCCCAAATAATAACAACAATTTGTACTATGGTGGTGGATATGGGAATAGCAATAATGGGGACATGGGGGAAGTAGTGGATAATAATAACAATAATAATAATATGGTGGTTCCTTATGATCAAGAAATGAATGATTCTAGTGTTGCAACAACTCAAGCAGTTTCTGTGACAACAATGAAGCAAGAAATTTGCAGTGGTGTGAGTGATCATAATAACAATAGGGTGTTGTGGGGATTTCCTTGGCAGATGAATAATGGATCAGATCACTCAAACATGGCTGAATTTGATTCTGCAAGAGCAAGTTGTTGGAACAATCTCAATTCTTCATCATCATGGCATGGACTTCTCAATAGTCCCCTAATGTAA 1008 0.4077 MDPSTAHQQIMSEQSLESMLVCSKAQQEQEDQNKKAIRPQPEQALKCPRCDSTNTKFCYYNNYSLSQPRYFCKSCRRYWTKGGTLRNVPVGGGCRKNKRSSSSSSKRGGQDQPFLNTNPHQNMNNPLLFSGFPTQLSCFDSSNDFALAIAARLQKGHHQQQQLGFDDHHDLSILGSTIGGSTTPNCDILGLNNSATATTTGTGFLDALRSGFLGTPNNNNNLYYGGGYGNSNNGDMGEVVDNNNNNNNMVVPYDQEMNDSSVATTQAVSVTTMKQEICSGVSDHNNNRVLWGFPWQMNNGSDHSNMAEFDSARASCWNNLNSSSSWHGLLNSPLM* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g3047 335 MobiDBLite consensus disorder prediction 1 40 - -
Aev04g3047 335 MobiDBLite consensus disorder prediction 96 122 - -
Aev04g3047 335 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Aev04g3047 335 MobiDBLite consensus disorder prediction 90 122 - -
Aev04g3047 335 MobiDBLite consensus disorder prediction 1 27 - -
Aev04g3047 335 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
Aev04g3047 335 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 334 IPR045174 GO:0003700|GO:0006355
Aev04g3047 335 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Aev04g3047 335 PANTHER DOF ZINC FINGER PROTEIN DOF3.2-LIKE 7 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g3047 Aev-Chr4 30212989 30214547 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g3047 1 335 C2C2-Dof Transcription Factor Family AT2G28510 38.286 1.40e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g3047 zf-Dof 7.3e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g3047 - - dzi:111285777 295.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g3047 04 30212989 30214547 Aev04g3047 04 30212989 30214547 ECH
Aev10g1878 10 20334730 20336449 Aev04g3047 04 30212989 30214547 PCT