Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g1605 ATGGGTTTATCTTCTCTTCACGTTTGCATGGACTCATCAGATCATTGGTTGCAGGATGAGGGAGGGATAATGGAGTCATGTTCATCTCCAATATCAGGTGGTGAGATGGTGATGACATGCACAACAAGGCCTTCTTCTTCTTCAATGATAGGAGGAGGAGGAGAGAGGAGGCTAAGGCCACCACATGACCAATCCCTGAAATGTCCAAGATGTGACTCAACACACACCAAATTCTGCTACTACAACAACTACAGCCTCTCCCAACCAAGGTACTTCTGCAAGACTTGCAGAAGCAAGAACAGGGCTGCTCTGATGCAGGGAAAGACTCATTTGGGTATGGATCTTGGTCTGCCATGA 357 0.4706 MGLSSLHVCMDSSDHWLQDEGGIMESCSSPISGGEMVMTCTTRPSSSSMIGGGGERRLRPPHDQSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRSKNRAALMQGKTHLGMDLGLP* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g1605 118 MobiDBLite consensus disorder prediction 44 65 - -
Aev04g1605 118 ProSiteProfiles Zinc finger Dof-type profile. 66 118 IPR003851 GO:0003677|GO:0006355
Aev04g1605 118 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 21 98 - -
Aev04g1605 118 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 98 IPR045174 GO:0003700|GO:0006355
Aev04g1605 118 Pfam Dof domain, zinc finger 63 99 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g1605 Aev-Chr4 11706332 11708231 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g1605 1 97 C2C2-Dof Transcription Factor Family AT5G62940 56.481 2.86e-33 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g1605 zf-Dof 6.4e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g1605 - - gmx:778107 139.043