Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0612 ATGGGTTTGAGTTCTAAGCAGGTTTGTAGTAGCACAGGACTTGATTGGAACAAGACCTTGTTGCAATCACAAAACTTGGAGGTACCAAAGGCAGTTCCTGGTTCCATGAAGAAGCAGCAACAATCTCAGCAAGGTGCAGAGCCTTTGAAGTGCCCAAGATGTGATTCAACAAACACCAAATTCTGTTACTACAACAACTACAACAAGTCTCAGCCTCGCCATTTCTGCAGGGCTTGTAAGAGGCACTGGACTAAAGGTGGGACTCTGAGGAATGTTCCTGTTGGTGGTGGAAGGAAGAACAAGAGACCAAAGAAATCAACCACCACCACTTCTTCTATTAGCACCATCACAGTTCCTCCTCTTGGTTTGAATGATCAGAAAAGCATGTCTTCCTCTCTCTACCAATCCATGATTCGTCCACCACCTTTGCTGCCACAGCAGAATCTGATCAGTGTCAGAGACTCATCAGAAGTTAAAGACTTTGGTGGTGGTGGTGGTGGTGGTGGCATGTTTGTGAGTTCATCTATGACTCTTCCTCAAAGCCAAGGCCTTCTTTTTCCCTTCTCAACACCAAGCTCTTTTGATGCAAACCCATGTTCAGTGTCAGCATCCGATGTTTATAGCTATGGAGAAGAGTTTAAAACAATGGAGGAGCCAGAGGCAGAGGCAGAGCAAGAACCAACCATGAGTACTAGCATAATGCCAAGCACTAGTGGTGGTGCCAACACACAGCTATGGGAGATACCTGCAACAAGCACTGCCATGGAAGTGTCAAACTATTGGGGTTGGGAGGATCTTGATTCATTGGTCTCAACTGATCTGAATGTTCCTTGGGATGATTCTGATATCAAACCTTGA 858 0.4557 MGLSSKQVCSSTGLDWNKTLLQSQNLEVPKAVPGSMKKQQQSQQGAEPLKCPRCDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRPKKSTTTTSSISTITVPPLGLNDQKSMSSSLYQSMIRPPPLLPQQNLISVRDSSEVKDFGGGGGGGGMFVSSSMTLPQSQGLLFPFSTPSSFDANPCSVSASDVYSYGEEFKTMEEPEAEAEQEPTMSTSIMPSTSGGANTQLWEIPATSTAMEVSNYWGWEDLDSLVSTDLNVPWDDSDIKP* 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0612 285 ProSitePatterns Zinc finger Dof-type signature. 51 87 IPR003851 GO:0003677|GO:0006355
Aev04g0612 285 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 174 IPR045174 GO:0003700|GO:0006355
Aev04g0612 285 ProSiteProfiles Zinc finger Dof-type profile. 49 103 IPR003851 GO:0003677|GO:0006355
Aev04g0612 285 PANTHER OS06G0284500 PROTEIN 29 174 - -
Aev04g0612 285 Pfam Dof domain, zinc finger 48 101 IPR003851 GO:0003677|GO:0006355
Aev04g0612 285 MobiDBLite consensus disorder prediction 106 124 - -
Aev04g0612 285 MobiDBLite consensus disorder prediction 90 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0612 Aev-Chr4 3776781 3777638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0612 49 134 C2C2-Dof Transcription Factor Family AT5G60200 58.621 5.60e-30 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g0612 zf-Dof 1.5e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0612 - - gmx:778119 322.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev03g0065 03 721118 721900 Aev04g0612 04 3776781 3777638 PCT