Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0560 ATGGAGCAAGGAGGAGGAGACAAGAACCAGCAGCAGCAGCCTCATCAGGATCGGAAGGAGAAGGAGGTTATGCAGCAAGGAACAGAGGCAGAGGTTGAGAGTGCTCCTCCACCTCAGCCCCCTCAGCAGCCTGTGAAGTGTCCTCGCTGTGAGTCTGTGAACACAAAGTTCTGTTACTACAACAACTACAGCTTGTCGCAGCCTCGATTCTTCTGCAAGACGTGCAGAAGGTACTGGACTCATGGTGGAACCTTGAGGAATGTCCCTGTTGGTGGCAGCTGCCGCAAGGCCAAGCGCGCAAGGGACTCTCAGTCTTCTGCTGAGAACTCTGCTTCCTCTTCCCGCTTCAATAACCGTCAGCAGCCGCAGCCACAGGTAGCAGCATCTCAGGAGATTCATCAGCCAAACCACCAGCACCAGCACCTGATGGCACCTGTGATGATGGGGTCTAGAGACATTTTTCCTTTGGGGCTCCCTTCTCATCTCACCACTCACTTTTTACAAGGTGGTGGTTTTGGTCTTGGTTCTGCTTCTGCTGCTGCTCTTGGGGGGATTCATCATCAGTCCTCATCACTGAATCCACCACCAAATAATAACCCTTTTGATCTGCAGGCTCTCAATGTTGGTGTTGGTGGTGCTACTACTAGTAATCTGCAGGGTGTTCTGTCTGGTTTGATCAATGCTAATAATAATAGCAATGTGGCTGATTCTGTTGTTGGAGGACATCAGCGCCTAATTCGGCCATCCTCTCATCAGCAGTACTTTCAATTGGGTGTGGGAGAGAGGGATCTTGTGGACCCTCTGTTTCCACCTATTTCAGAACAGCTGCAAGCATTGATGATTCCTTCATCATCCTCAACCATGGCTAATAGTAGCACTAGTGCTGGAATTCACCCTGATTGGGCTCATCATCATCAGAGGTTCATCACTGTCACTGATGCTGCTGCTAATAACAATAACAACAATATTGCTGCTGGTGGCTCTATGTGGAGCACTGTCAGCAGCACTGCTTTCAGTGCAAATGGAAACAACTCTCATCAGAGGCAGAGGAATGTTGCTGCTTCTGCTGCTGCTACTGCTGATGTGATGCCAAATCATCATCAGTGGCCTAATGTGCCAGGTTTTGGGCCACCACCGCCCCCACCCCCATCATCTTTCTGA 1161 0.5022 MEQGGGDKNQQQQPHQDRKEKEVMQQGTEAEVESAPPPQPPQQPVKCPRCESVNTKFCYYNNYSLSQPRFFCKTCRRYWTHGGTLRNVPVGGSCRKAKRARDSQSSAENSASSSRFNNRQQPQPQVAASQEIHQPNHQHQHLMAPVMMGSRDIFPLGLPSHLTTHFLQGGGFGLGSASAAALGGIHHQSSSLNPPPNNNPFDLQALNVGVGGATTSNLQGVLSGLINANNNSNVADSVVGGHQRLIRPSSHQQYFQLGVGERDLVDPLFPPISEQLQALMIPSSSSTMANSSTSAGIHPDWAHHHQRFITVTDAAANNNNNNIAAGGSMWSTVSSTAFSANGNNSHQRQRNVAASAAATADVMPNHHQWPNVPGFGPPPPPPPSSF* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0560 386 MobiDBLite consensus disorder prediction 12 27 - -
Aev04g0560 386 MobiDBLite consensus disorder prediction 104 137 - -
Aev04g0560 386 MobiDBLite consensus disorder prediction 1 47 - -
Aev04g0560 386 MobiDBLite consensus disorder prediction 371 386 - -
Aev04g0560 386 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 6 378 IPR045174 GO:0003700|GO:0006355
Aev04g0560 386 MobiDBLite consensus disorder prediction 364 386 - -
Aev04g0560 386 MobiDBLite consensus disorder prediction 89 138 - -
Aev04g0560 386 Pfam Dof domain, zinc finger 43 99 IPR003851 GO:0003677|GO:0006355
Aev04g0560 386 ProSiteProfiles Zinc finger Dof-type profile. 45 99 IPR003851 GO:0003677|GO:0006355
Aev04g0560 386 ProSitePatterns Zinc finger Dof-type signature. 47 83 IPR003851 GO:0003677|GO:0006355
Aev04g0560 386 PANTHER DOF ZINC FINGER PROTEIN DOF5.4-LIKE ISOFORM X1 6 378 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0560 Aev-Chr4 3493272 3494432 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0560 34 190 C2C2-Dof Transcription Factor Family AT3G45610 43.636 1.18e-34 126
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g0560 zf-Dof 5.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0560 - - dzi:111281032 162.925