Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aev04g0559 ATGGAAAAAGCGGGTCATGAGCAGCAGCAGCAAGGAGCACTAAAGTGCCCTCGGTGCGATTCATCCAACACAAAGTTCTGTTACTACAACAACTACAGCCTGTCACAGCCAAGGCACTTCTGCAAAGCCTGCAAGCGGTATTGGACAAGGGGTGGAACCTTAAGGAATGTCCCTGTTGGCGGTGGCTGCAGAAAGAACAAGCACCACCGTCTCAAGCGCCCATCAACAACACCAACAACAGCTGATCCTTCTTCAGCTCCTCCGCACTCCCAACTTCTTCATCAGACTGATCCTGCTCCTTCTTCCAATCATCATCATCATCATCATGTCAACCCTTTGTTTCATGGTCTAGCTTATGCTTCTGCTGGTAGCAACCCTTGTGATGATGTGAATAATAATAATCTTGCATTATTTTCATCAAGGTTCCTCAGCTCCTCCAGAATCCCAAGCAGCTCTGGATTATTTGATCTGATTCAGCCGCCTCAGATGAATAATAATGCGCTTGGATTAGGTTTTTCTTCCGGGGGGGTTATGTCCACTGATAACGGCTTCTTCACTTCAAATATTAGTAATCATGATAATAACAACACGCCTTTTCCGATTAGCTATACTTCAATCTTCAGTTCTTCTTCTTCCGCTTGTTCTTCAACTTGTACTACCACTACTATGATGCCCAATAATAATTCATCAGTGTTGGGATCTAGCATGATGATGATGCAACATCAACAGCAACAGCACAAGCACAAGCACAAGGTAGTGATGAATAATAATAATGGTGGAAGAAACATGATCACTTCTTTTGATGGGGGATTAGTAGAAGTAGCCCCACAAATGGGAGTAAGTGGTGATGATGATGTTGAGGGTGTAGTGGGTGCTTCGAAAGATGTGAAAGTAGAATTAGGACAGAACAGGTTGTTGGAGTTCAGCTGGAATAATACTACTCCTAGTGGTGGTGGTGGTAGTGGTACTAATTTCCAAAACCAGCAGCACGTGATGAATGGGACGATGATGAGCATCTCTGATCCTAATCCTAATTCTAATTCCCTTTATTGGAATTCTACAGCAGCAGCAGCTTTGGGTGGTTCTAATTGGAGCGACCAACCTAATAATATTGCTCCATCACTAACTACTTCATTCTCTCATCTAGCTACAAAATTACTTTAA 1164 0.433 MEKAGHEQQQQGALKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKHHRLKRPSTTPTTADPSSAPPHSQLLHQTDPAPSSNHHHHHHVNPLFHGLAYASAGSNPCDDVNNNNLALFSSRFLSSSRIPSSSGLFDLIQPPQMNNNALGLGFSSGGVMSTDNGFFTSNISNHDNNNTPFPISYTSIFSSSSSACSSTCTTTTMMPNNNSSVLGSSMMMMQHQQQQHKHKHKVVMNNNNGGRNMITSFDGGLVEVAPQMGVSGDDDVEGVVGASKDVKVELGQNRLLEFSWNNTTPSGGGGSGTNFQNQQHVMNGTMMSISDPNPNSNSLYWNSTAAAALGGSNWSDQPNNIAPSLTTSFSHLATKLL* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aev04g0559 387 Pfam Dof domain, zinc finger 13 68 IPR003851 GO:0003677|GO:0006355
Aev04g0559 387 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-LIKE 5 325 - -
Aev04g0559 387 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Aev04g0559 387 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Aev04g0559 387 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 5 325 IPR045174 GO:0003700|GO:0006355
Aev04g0559 387 MobiDBLite consensus disorder prediction 58 108 - -
Aev04g0559 387 MobiDBLite consensus disorder prediction 76 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aev04g0559 Aev-Chr4 3483515 3484678 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aev04g0559 14 202 C2C2-Dof Transcription Factor Family AT1G28310 52.332 9.13e-37 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Aev04g0559 zf-Dof 2.6e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Aev04g0559 - - cam:101512658 209.149
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aev04g0559 04 3483515 3484678 Aev04g0559 04 3483515 3484678 ECH